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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,4 +1,5 @@ | ||
| .idea/ | ||
| .vscode/ | ||
| *.py[c|o] | ||
| *~*.* | ||
| /build | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,54 +1,70 @@ | ||
| #!/bin/bash | ||
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| set -ex | ||
| module unload python | ||
| module unload python3 | ||
| module load python3 | ||
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| set -eux | ||
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| mod_version=${1:-3.0.0.post1} | ||
| if [[ $# -gt 0 ]]; then shift; fi | ||
| hosts=${@:-deploy@aa-login deploy@ab-login deploy@ac-login deploy@ad-login} | ||
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| mod_version=${1:-2.1.1} | ||
| assets_version=$mod_version | ||
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| echo "module version to be installed: $mod_version" | ||
| echo "on hosts: $hosts" | ||
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| # Where is pyg2p source code | ||
| src_dir=$PWD | ||
| src_host=$HOST | ||
| src_host=hpc-login | ||
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| # where to install it | ||
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| dest_dir=/usr/local/apps/pyg2p/$mod_version | ||
| eccodes=eccodes/2.24.0 | ||
| for dest_host in $hosts; do | ||
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| #for host in localhost lxc ecgb lxop cca ccb; do | ||
| for dest_host in lxc lxop cca ccb; do | ||
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| case $dest_host in | ||
| lxc* ) static_data_root=/gpfs/lxc/efas/emos/data/pyg2p/$assets_version ;; | ||
| lxop* ) static_data_root=/gpfs/lxop/efas/emos/data/pyg2p/$assets_version ;; | ||
| cca* ) static_data_root=/sc1/tcwork/emos/emos_data/efas/assets/pyg2p/$assets_version ;; | ||
| ccb* ) static_data_root=/sc2/tcwork/emos/emos_data/efas/assets/pyg2p/$assets_version ;; | ||
| * ) "unexpected target host $dest_host"; false ;; | ||
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| deploy@a?-login ) dest_dir=/usr/local/apps/pyg2p/$mod_version | ||
| static_data_root=/usr/local/apps/pyg2p/data | ||
| eccodes=ecmwf-toolbox/2022.08.0.0 ;; | ||
| * ) echo "unexpected target host $dest_host"; false ;; | ||
| esac | ||
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| echo installing pyg2p/$mod_version in $dest_host .... | ||
| if ssh $dest_host [[ -d $dest_dir ]]; then | ||
| if ssh -x $dest_host [[ -d $dest_dir ]]; then | ||
| case $mod_version in | ||
| dev | test ) echo "reinstalling pyg2p/$mod_version" ;; | ||
| *dev* | *test | 3.0.0-01 | 3.0.1 | 3.0.0.post1 ) echo "reinstalling pyg2p/$mod_version" ;; | ||
| * ) echo "module pyg2p/$mod_version is already installed on $dest_host. skipping."; continue ;; | ||
| esac | ||
| fi | ||
| ssh $dest_host bash -l << END | ||
| module unload python | ||
| module load python/2.7.15-01 | ||
| umask 022 | ||
| ssh -x $dest_host bash -l << END | ||
| set -eux | ||
| echo \$TMPDIR | ||
| cd \$TMPDIR | ||
| rsync -avz --exclude='.git/' $src_host:$src_dir . | ||
| module unload python3 python gdal grib_api eccodes || : | ||
| module load $eccodes | ||
| module load gdal/3.2.1 | ||
| module load python3/3.8.8-01 | ||
| module load gcc || : # on HPC ;; | ||
| umask 022 | ||
| mkdir -p \$SCRATCH/tmp_pyg2p | ||
| cd \$SCRATCH/tmp_pyg2p/ | ||
| rsync -avz --exclude='.git/' -e ssh $src_host:$src_dir . | ||
| cd pyg2p | ||
| echo '{ | ||
| "geopotentials": "$static_data_root/geopotentials", | ||
| "intertables": "$static_data_root/intertables" | ||
| } | ||
| ' > configuration/global/global_conf.json | ||
| export HTTPS_PROXY=http://proxy.ecmwf.int:3333 | ||
| export PYTHONPATH=/usr/local/apps/pyg2p/$mod_version/lib/python2.7/site-packages | ||
| python setup.py clean --all | ||
| python_version=\$(python3 -c "import sys; print(f'python{sys.version_info.major}.{sys.version_info.minor}')") | ||
| export PYTHONPATH=$dest_dir/lib/\$python_version/site-packages | ||
| python3 setup.py clean --all | ||
| mkdir -p \$PYTHONPATH | ||
| python setup.py install --prefix=/usr/local/apps/pyg2p/$mod_version | ||
| PYTHONPATH=\$ECCODES_DIR/lib/\$python_version/site-packages/:\$PYTHONPATH | ||
| python3 setup.py install --prefix=$dest_dir | ||
| END | ||
| echo done | ||
| done |
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