deps: update dependencies to latest versions (#166)

The updates that induced changes were:

- (Zenoh-Flow) flume 0.10 -> 0.11: as we were explicitly defining the
  Subscriber (in particular the `Receiver<Sample>`), the version of flume we
  were using was tied to Zenoh's. By using Zenoh's `FlumeSubscriber`, we can
  update the version of flume independently of Zenoh.

- (cargo-zenoh-flow) toml 0.5 -> 0.7: parsing must be done via a String rather
  than via slice.

Signed-off-by: Julien Loudet <julien.loudet@zettascale.tech>

Cargo.toml

@@ -33,7 +33,22 @@ repository = "https://github.com/eclipse-zenoh/zenoh-flow"
 version = "0.6.0-dev"
 
 [workspace.dependencies]
-clap = { version = "4.0" }
+async-std = "1.12"
+async-trait = "0.1.50"
+base64 = "0.21"
+clap = "4.0"
+env_logger = "0.10"
+flume = "0.11"
+futures = "0.3.15"
+git-version = "0.3"
+log = "0.4"
+serde = "1.0"
+serde_cbor = "0.11"
+serde_derive = "1.0"
+serde_json = "1.0"
+serde_yaml = "0.9"
+uhlc = "0.6"
+uuid = "1.1"
 zenoh = { version = "0.7.2-rc" }
 zenoh-collections = { version = "0.7.2-rc" }
 zenoh-core = { version = "0.7.2-rc" }

cargo-zenoh-flow/Cargo.toml

@@ -27,17 +27,17 @@ version.workspace = true
 # See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html
 
 [dependencies]
-async-std = { version = "=1.12.0", features = ["attributes"] }
-cargo_toml = "0.13"
+async-std = { workspace = true, features = ["attributes"] }
+cargo_toml = "0.15"
 clap = { workspace = true, features = ["derive"] }
 colored = "2"
 rand = { version = "0.8", optional = true }
-serde = { version = "1.0", features = ["derive"] }
-serde_derive = "1.0"
-serde_json = "1.0"
-serde_yaml = { version = "0.9" }
+serde = { workspace = true, features = ["derive"] }
+serde_derive = { workspace = true }
+serde_json = { workspace = true }
+serde_yaml = { workspace = true }
 tinytemplate = "1.2"
-toml = "0.5.8"
+toml = "0.7"
 zenoh = { workspace = true, optional = true }
 zenoh-flow = { path = "../zenoh-flow", version = "0.6.0-dev" }
 zenoh-util = { workspace = true, optional = true }

cargo-zenoh-flow/src/utils.rs

@@ -118,24 +118,24 @@ pub fn from_manifest(
     let manifest_path = Path::new(&root_package.manifest_path);
 
     let manifest_dir = manifest_path.parent().unwrap();
-    let content = std::fs::read(manifest_path)?;
-
-    let metadata = toml::from_slice::<Cargo>(&content)?
-        .package
-        .metadata
-        .ok_or_else(|| {
-            CZFError::MissingField(
-                root_package.id.clone(),
-                "Missing package.metadata.zenohflow",
-            )
-        })?
-        .zenohflow
-        .ok_or_else(|| {
-            CZFError::MissingField(
-                root_package.id.clone(),
-                "Missing package.metadata.zenohflow",
-            )
-        })?;
+
+    let metadata =
+        toml::from_str::<Cargo>(&String::from_utf8_lossy(&std::fs::read(manifest_path)?))?
+            .package
+            .metadata
+            .ok_or_else(|| {
+                CZFError::MissingField(
+                    root_package.id.clone(),
+                    "Missing package.metadata.zenohflow",
+                )
+            })?
+            .zenohflow
+            .ok_or_else(|| {
+                CZFError::MissingField(
+                    root_package.id.clone(),
+                    "Missing package.metadata.zenohflow",
+                )
+            })?;
 
     Ok((metadata, target_dir.into(), manifest_dir.into()))
 }

zenoh-flow-daemon/Cargo.toml

@@ -24,26 +24,24 @@ readme.workspace = true
 repository.workspace = true
 version.workspace = true
 
-# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html
-
 [dependencies]
 async-ctrlc = { version = "1.2.0", features = ["stream"] }
-async-std = { version = "=1.12.0", features = ["attributes"] }
-async-trait = "0.1.50"
+async-std = { workspace = true, features = ["attributes"] }
+async-trait = { workspace = true }
 clap = { workspace = true, features = ["derive"] }
-env_logger = "0.10.0"
-flume = "0.10"
-futures = "0.3.5"
-git-version = "0.3"
+env_logger = { workspace = true }
+flume = { workspace = true }
+futures = { workspace = true }
+git-version = { workspace = true }
 hostname = "0.3.1"
-log = "0.4"
-machine-uid = "0.2.0"
-serde = { version = "1.0", features = ["derive", "rc"] }
-serde_derive = "1.0"
-serde_json = "1.0"
-serde_yaml = { version = "0.9" }
-uhlc = "0.5.1"
-uuid = { version = "1.1", features = ["serde", "v4"] }
+log = { workspace = true }
+machine-uid = "0.5.0"
+serde = { workspace = true, features = ["derive", "rc"] }
+serde_derive = { workspace = true }
+serde_json = { workspace = true }
+serde_yaml = { workspace = true }
+uhlc = { workspace = true }
+uuid = { workspace = true, features = ["serde", "v4"] }
 zenoh = { workspace = true }
 zenoh-flow = { version = "0.6.0-dev", path = "../zenoh-flow" }
 zenoh-util = { workspace = true }

zenoh-flow-derive/Cargo.toml

@@ -28,19 +28,19 @@ version.workspace = true
 
 [dependencies]
 Inflector = "0.11.4"
-async-std = { version = "=1.12.0", features = ["attributes"] }
-darling = "0.14"
-futures = "0.3.5"
+async-std = { workspace = true, features = ["attributes"] }
+darling = "0.20"
+futures = { workspace = true }
 proc-macro-error = "1.0.4"
 proc-macro2 = "1.0"
 quote = "1.0"
-serde = { version = "1.0.55", features = ["derive"] }
-serde_derive = "1.0.55"
-syn = { version = "1.0", features = ["full"] }
-syn-serde = { version = "0.2", features = ["json"] }
+serde = { workspace = true, features = ["derive"] }
+serde_derive = { workspace = true }
+syn = { version = "2", features = ["full"] }
+syn-serde = { version = "0.3", features = ["json"] }
 
 [dev-dependencies]
-env_logger = "0.9"
+env_logger = { workspace = true }
 
 [lib]
 proc-macro = true

zenoh-flow-plugin/Cargo.toml

@@ -33,17 +33,17 @@ default = ["no_mangle"]
 no_mangle = ["zenoh-plugin-trait/no_mangle"]
 
 [dependencies]
-async-std = "=1.12.0"
-async-trait = "0.1.57"
+async-std = { workspace = true }
+async-trait = { workspace = true }
 clap = { workspace = true }
-env_logger = "0.10"
-flume = "0.10.14"
-futures = "0.3.24"
-git-version = "0.3.5"
+env_logger = { workspace = true }
+flume = { workspace = true }
+futures = { workspace = true }
+git-version = { workspace = true }
 lazy_static = "1.4.0"
-log = "0.4.17"
-serde = { version = "1.0", features = ["derive", "rc"] }
-serde_json = "1.0"
+log = { workspace = true }
+serde = { workspace = true, features = ["derive", "rc"] }
+serde_json = { workspace = true }
 zenoh = { workspace = true, features = ["unstable"] }
 zenoh-collections = { workspace = true }
 zenoh-core = { workspace = true }

zenoh-flow/Cargo.toml

@@ -28,38 +28,38 @@ version.workspace = true
 anyhow = { version = "1.0", default-features = false, features = ["std"] }
 async-lock = "2.4.0"
 async-recursion = "1.0.0"
-async-std = { version = "=1.12.0", features = ["attributes"] }
-async-trait = "0.1.50"
-base64 = "0.20.0"
+async-std = { workspace = true, features = ["attributes"] }
+async-trait = { workspace = true }
+base64 = { workspace = true }
 bincode = { version = "1.3" }
 bytesize = "1.2.0"
 clap = { workspace = true, features = ["derive"] }
 const_format = "0.2.22"
 derive_more = "0.99.10"
-env_logger = "0.10"
-event-listener = "2.5.1"
-flume = "0.10"
-futures = "0.3.15"
+env_logger = { workspace = true }
+event-listener = "3.0"
+flume = { workspace = true }
+futures = { workspace = true }
 futures-lite = "1.12"
-git-version = "0.3"
-humantime = "2.1.0"
-itertools = "0.10.3"
-libloading = "0.7.0"
-log = "0.4"
+git-version = { workspace = true }
+humantime = "2.1"
+itertools = "0.11"
+libloading = "0.8"
+log = { workspace = true }
 more-asserts = "0.3"
 paste = "1.0"
 petgraph = "0.6.0"
 pin-project-lite = "0.2.4"
 ramhorns = "0.14"
-serde = { version = "1.0.55", features = ["derive", "rc"] }
+serde = { workspace = true, features = ["derive", "rc"] }
 serde_cbor = { version = "0.11", optional = true }
-serde_derive = "1.0.55"
-serde_json = { version = "1.0", optional = true }
-serde_yaml = { version = "0.9" }
+serde_derive = { workspace = true }
+serde_json = { workspace = true, optional = true }
+serde_yaml = { workspace = true }
 typetag = "0.2"
-uhlc = "0.5.1"
+uhlc = { workspace = true }
 url = "2.2"
-uuid = { version = "1.1", features = ["serde", "v4"] }
+uuid = { workspace = true, features = ["serde", "v4"] }
 zenoh = { workspace = true, features = ["shared-memory"] }
 zenoh-flow-derive = { version = "0.6.0-dev", path = "../zenoh-flow-derive" }
 zenoh-sync = { workspace = true }
@@ -68,7 +68,7 @@ zrpc = { workspace = true }
 zrpc-macros = { workspace = true }
 
 [dev-dependencies]
-prost = "0.11"
+prost = "0.12"
 tempdir = "0.3.7"
 
 [build-dependencies]

zenoh-flow/src/runtime/dataflow/instance/builtin/zenoh.rs

@@ -28,13 +28,13 @@ use crate::{
 };
 use async_std::sync::Mutex;
 use async_trait::async_trait;
-use flume::{Receiver, RecvError};
 use futures::{future::select_all, Future};
-use std::mem;
 use std::sync::Arc;
 use std::{collections::HashMap, pin::Pin};
+use std::{error::Error, mem};
 use zenoh::{
-    prelude::r#async::*, publication::Publisher, shm::SharedMemoryManager, subscriber::Subscriber,
+    prelude::r#async::*, publication::Publisher, shm::SharedMemoryManager,
+    subscriber::FlumeSubscriber,
 };
 
 /// Key for the key expressions used by the built-in Source/Sink.
@@ -51,12 +51,13 @@ static KEY_SHM_TOTAL_ELEMENTS: &str = "shared_memory_elements";
 static KEY_SHM_BACKOFF: &str = "shared_memory_backoff";
 
 /// Internal type of pending futures for the ZenohSource
-pub(crate) type ZSubFut =
-    Pin<Box<dyn Future<Output = (PortId, Result<Sample, RecvError>)> + Send + Sync>>;
+pub(crate) type ZSubFut = Pin<
+    Box<dyn Future<Output = (PortId, Result<Sample, Box<dyn Error + Send + Sync>>)> + Send + Sync>,
+>;
 
-fn wait_zenoh_sub(id: PortId, sub: &Subscriber<Receiver<Sample>>) -> ZSubFut {
+fn wait_zenoh_sub(id: PortId, sub: &FlumeSubscriber<'_>) -> ZSubFut {
     let sub = sub.receiver.clone();
-    Box::pin(async move { (id, sub.recv_async().await) })
+    Box::pin(async move { (id, sub.recv_async().await.map_err(|e| e.into())) })
 }
 
 /// The builtin Zenoh Source
@@ -70,7 +71,7 @@ fn wait_zenoh_sub(id: PortId, sub: &Subscriber<Receiver<Sample>>) -> ZSubFut {
 pub(crate) struct ZenohSource<'a> {
     _session: Arc<Session>,
     outputs: HashMap<PortId, OutputRaw>,
-    subscribers: HashMap<PortId, Subscriber<'a, Receiver<Sample>>>,
+    subscribers: HashMap<PortId, FlumeSubscriber<'a>>,
     futs: Arc<Mutex<Vec<ZSubFut>>>,
 }
 
@@ -136,7 +137,7 @@ impl<'a> Source for ZenohSource<'a> {
         mut outputs: Outputs,
     ) -> ZFResult<Self> {
         let mut source_outputs: HashMap<PortId, OutputRaw> = HashMap::new();
-        let mut subscribers: HashMap<PortId, Subscriber<'a, Receiver<Sample>>> = HashMap::new();
+        let mut subscribers: HashMap<PortId, FlumeSubscriber<'a>> = HashMap::new();
 
         match configuration {
             Some(configuration) => {

zenoh-flow/src/runtime/dataflow/instance/runners/connector.rs

@@ -23,12 +23,11 @@ use crate::zfresult::ErrorKind;
 use crate::Result as ZFResult;
 use async_std::sync::Mutex;
 use async_trait::async_trait;
-use flume::Receiver;
 use std::sync::atomic::AtomicU64;
 use std::sync::Arc;
 use zenoh::prelude::r#async::*;
 use zenoh::shm::SharedMemoryManager;
-use zenoh::subscriber::Subscriber;
+use zenoh::subscriber::FlumeSubscriber;
 use zenoh_util::core::AsyncResolve;
 
 /// The `ZenohSender` is the connector that sends the data to Zenoh when nodes are running on
@@ -258,7 +257,7 @@ impl Node for ZenohSender {
 pub(crate) struct ZenohReceiver {
     pub(crate) id: NodeId,
     pub(crate) output_raw: OutputRaw,
-    pub(crate) subscriber: Subscriber<'static, Receiver<Sample>>,
+    pub(crate) subscriber: FlumeSubscriber<'static>,
 }
 
 impl ZenohReceiver {

zenoh-flow/src/runtime/resources.rs

@@ -779,7 +779,7 @@ impl DataStore {
     pub async fn subscribe_sumbitted_jobs(
         &self,
         rtid: &ZenohId,
-    ) -> Result<zenoh::subscriber::Subscriber<'static, flume::Receiver<Sample>>> {
+    ) -> Result<zenoh::subscriber::FlumeSubscriber<'static>> {
         let selector = JQ_SUMBITTED_SEL!(ROOT_STANDALONE, rtid);
         self.z.declare_subscriber(&selector).res().await
     }

zfctl/Cargo.toml

@@ -25,25 +25,25 @@ repository.workspace = true
 version.workspace = true
 
 [dependencies]
-async-std = { version = "=1.12.0", features = ["attributes"] }
-base64 = "0.20.0"
+async-std = { workspace = true, features = ["attributes"] }
+base64 = { workspace = true }
 clap = { workspace = true, features = ["derive"] }
 derive_more = "0.99.10"
 # FIXME: Remove when `std::env::home_dir` gets fixed.
-dirs = "4.0.0"
-env_logger = "0.10.0"
+dirs = "5.0"
+env_logger = { workspace = true }
 exitfailure = "0.5.1"
 failure = "0.1.8"
-git-version = "0.3.4"
-log = "0.4"
+git-version = { workspace = true }
+log = { workspace = true }
 prettytable-rs = "^0.10"
 rand = "0.8.3"
 semver = { version = "1.0.4", features = ["serde"] }
-serde = { version = "1.0.55", features = ["derive"] }
-serde_derive = "1.0.55"
-serde_json = "1.0.55"
-serde_yaml = "0.9"
-uuid = { version = "1.1", features = ["serde", "v4"] }
+serde = { workspace = true, features = ["derive"] }
+serde_derive = { workspace = true }
+serde_json = { workspace = true }
+serde_yaml = { workspace = true }
+uuid = { workspace = true, features = ["serde", "v4"] }
 zenoh = { workspace = true }
 zenoh-flow = { version = "0.6.0-dev", path = "../zenoh-flow" }
 zenoh-util = { workspace = true }