Snakemake workflow to map and quantify prevalence and abundance of genomes in metagenomes, using two different reference catalogs.
metaMap-multiKingdom is an extension ot the metaMap pipeline further described here.
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Snakemake workflow to map and quantify microbial and viral genomes in metagenomic reads
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efratmuller/metamap_multik
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Snakemake workflow to map and quantify microbial and viral genomes in metagenomic reads
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- Python 61.3%
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