update version #36
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name: starfish apptainer build and push | |
on: | |
push: | |
branches: | |
- main # or any other branch you want to trigger the workflow | |
jobs: | |
apptainer-build-and-push: | |
runs-on: ubuntu-latest | |
permissions: | |
contents: read | |
packages: write | |
container: | |
image: quay.io/singularity/singularity:v3.8.1 | |
options: --privileged | |
steps: | |
- name: Checkout Repository | |
uses: actions/checkout@v2 | |
# Step to set up Apptainer and build the .sif image | |
- name: Build Apptainer Image | |
run: | | |
singularity build starfish.sif apptainer/starfish.def | |
- name: Login and Deploy Container | |
run: | | |
echo ${{ secrets.GITHUB_TOKEN }} | singularity remote login -u ${{ secrets.GHCR_USERNAME }} --password-stdin oras://ghcr.io | |
singularity push starfish.sif oras://ghcr.io/${GITHUB_REPOSITORY}:${tag} |