Skip to content

elishowk/easiparse

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

28 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

#Easiparse

##What for ?

Parsing and importing to mongodb any flat text file following a flexible configuration. A flat text file is for example MEDLINE format from pubmed.gov :

PMID- 19712554 OWN - NLM STAT- MEDLINE DA - 20090828 DCOM- 20091109 IS - 1472-6491 (Electronic) ...

##Dependencies

  • Python 2.6
  • MongoDB, and pymongo

##How-to

  • configure easiparse editing config.yaml
  • launch mongodb server
  • launch the software : $ python easiparse.py

About

python + mongodb flat text files importer

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages