mod: include trans-rot-projector in inverse of Wilson-B mat #5375
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| name: Python application | |
| on: | |
| push: | |
| paths-ignore: | |
| - "docs/**" | |
| - "examples/**" | |
| - "scripts/**" | |
| - "nix/**" | |
| workflow_dispatch: | |
| schedule: | |
| - cron: '0 */12 * * *' | |
| jobs: | |
| buildNix: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: cachix/install-nix-action@v26 | |
| with: | |
| nix_path: nixpkgs=channel:nixpkgs-unstable | |
| extra_nix_config: access-tokens = github.com=${{ secrets.GITHUB_TOKEN }} | |
| - uses: cachix/cachix-action@v14 | |
| with: | |
| name: pysisyphus | |
| authToken: '${{ secrets.CACHIX_AUTH_TOKEN }}' | |
| - run: nix flake --allow-import-from-derivation check | |
| - run: nix build --print-build-logs | |
| - run: nix develop --command echo "" | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/cache@v4 | |
| with: | |
| path: ~/.cache/pip | |
| key: ${{ runner.os }}-pip- | |
| - name: Set up Python 3.12 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.12" | |
| - name: Upgrade pip | |
| run: | | |
| python -m pip install --upgrade pip | |
| - name: Install pysisyphus and dependencies required for testing | |
| run: | | |
| python -m pip install -e .[test] -r test-requirements.txt | |
| - name: Lint with flake8 | |
| run: | | |
| pip install flake8 | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics --config flake8.ini | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics --config flake8.ini | |
| - name: Install thermoanalysis | |
| run: | | |
| pip install git+https://github.com/eljost/thermoanalysis.git | |
| - name: Install geodesic-interpolate | |
| run: | | |
| pip install git+https://github.com/virtualzx-nad/geodesic-interpolate.git | |
| - name: Test with pytest | |
| run: > | |
| pytest -v | |
| --cov=pysisyphus --cov-config .coveragerc --cov-report xml --cov-report term | |
| --color=yes | |
| --show-capture=no | |
| --durations=0 | |
| -m "not benchmark and not skip_ci" | |
| tests | |
| - name: Upload coverage to codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| file: ./coverage.xml | |
| flags: unittests | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} |