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DESCRIPTION
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Package: epichains
Title: Simulating and Analysing Transmission Chain Statistics Using
Branching Process Models
Version: 0.1.1.9000
Authors@R: c(
person("James M.", "Azam", , "james.azam@lshtm.ac.uk", role = c("aut", "cre", "cph"),
comment = c(ORCID = "0000-0001-5782-7330")),
person("Sebastian", "Funk", , "sebastian.funk@lshtm.ac.uk", role = c("aut", "cph"),
comment = c(ORCID = "0000-0002-2842-3406")),
person("Flavio", "Finger", , "flavio.finger@epicentre.msf.org", role = "aut",
comment = c(ORCID = "0000-0002-8613-5170")),
person("Zhian N.", "Kamvar", , "zkamvar@gmail.com", role = "ctb",
comment = c(ORCID = "0000-0003-1458-7108")),
person("Hugo", "Gruson", , "hugo@data.org", role = c("ctb", "rev"),
comment = c(ORCID = "0000-0002-4094-1476")),
person("Karim", "Mané", , "karim.mane@lshtm.ac.uk", role = "rev",
comment = c(ORCID = "0000-0002-9892-2999")),
person("Pratik", "Gupte", , "pratik.gupte@lshtm.ac.uk", role = "rev",
comment = c(ORCID = "0000-0001-5294-7819")),
person("Joshua W.", "Lambert", , "joshua.lambert@lshtm.ac.uk", role = "rev",
comment = c(ORCID = "0000-0001-5218-3046"))
)
Description: Provides methods to simulate and analyse the size and length
of branching processes with an arbitrary offspring distribution. These
can be used, for example, to analyse the distribution of chain sizes
or length of infectious disease outbreaks, as discussed in Farrington
et al. (2003) <doi:10.1093/biostatistics/4.2.279>.
License: MIT + file LICENSE
URL: https://github.com/epiverse-trace/epichains,
https://epiverse-trace.github.io/epichains/
BugReports: https://github.com/epiverse-trace/epichains/issues
Depends:
R (>= 3.6.0)
Imports:
checkmate,
stats,
utils
Suggests:
bookdown,
dplyr,
epicontacts,
ggplot2,
knitr,
lubridate,
rmarkdown,
spelling,
testthat,
truncdist
VignetteBuilder:
knitr
Config/Needs/website: epiverse-trace/epiversetheme
Config/testthat/edition: 3
Encoding: UTF-8
Language: en-GB
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2.9000