This repository interactively visualizes epigenetic data hosted on NEMO Archive(trackhub configurations) using Epiviz. Currently this sets up the Miniatlas workspace.
The script uses caddy to run the webserver but can be replaced with a Python http server or a local PHP server.
- Python, using a virtualenv is recommended.
- Bower, Install bower from http://bower.io/
- Caddy, Install caddy from http://caddyserver.com/
bash install.sh
The bash script install.sh will install the necessary dependencies to run the file server and the user interface.
bash epiviz.sh
The bash script epiviz.sh runs the file server and the user interface.
Open browser and go to http://localhost:2015/landingpage.html or http://localhost:2015/cellgroup.html
Caddy usually runs on port 2015, but check the terminal prompt for the port number and update this in the link above.
The repository uses the following packages -
