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make fasta optional - not required for biosample/sra submission.
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erikwolfsohn committed Aug 30, 2024
1 parent 2b91a66 commit f21f070
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion argument_handler.py
Original file line number Diff line number Diff line change
Expand Up @@ -72,7 +72,7 @@ def args_parser():
required=True)
file_parser.add_argument("--fasta_file",
help="Fasta file used to generate submission files; fasta header should match the column 'sequence_name' stored in your metadata. Input either full file path or if just file name it must be stored at '<submission_dir>/<submission_name>/<fasta_file>'.",
required=True)
default = None)
file_parser.add_argument("--table2asn",
help="Perform a table2asn submission instead of GenBank FTP submission for organism choices 'FLU' or 'COV'.",
required=False,
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