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checkpoint
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CarlKCarlK committed Dec 25, 2023
1 parent 7125834 commit 0b3adf3
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4 changes: 4 additions & 0 deletions bed_reader/_open_bed.py
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,7 @@
from itertools import repeat, takewhile
from pathlib import Path
from typing import Any, List, Mapping, Optional, Union
from object_store import ObjectStore

import numpy as np

Expand Down Expand Up @@ -216,7 +217,10 @@ def __init__(
skip_format_check: bool = False,
fam_filepath: Union[str, Path] = None,
bim_filepath: Union[str, Path] = None,
# cmk need docs
object_store: Optional[ObjectStore] = None,
):
# cmk need to read the .fam and .bim files and check file from cloud if requested
self.filepath = Path(filepath)
self.count_A1 = count_A1
self._num_threads = num_threads
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