version = "1.0.5"

Cargo.toml

@@ -1,5 +1,5 @@
 [package]
-version = "1.0.5-beta.3"
+version = "1.0.5"
 name = "bed-reader"
 description = "Read and write the PLINK BED format, simply and efficiently."
 repository = "https://github.com/fastlmm/bed-reader"

bed_reader/_open_bed.py

@@ -1832,8 +1832,6 @@ def _convert_to_dtype(str_arr, dtype):
         return str_arr
 
     try:
-        if str_arr[0].startswith("np."):
-            raise ValueError("invalid cmk for int: 'np.'")
         new_arr = str_arr.astype(dtype)
     except ValueError as e:
         if dtype == np.float32:

src/python_module.rs

@@ -50,7 +50,7 @@ fn bed_reader(_py: Python<'_>, m: &Bound<'_, PyModule>) -> PyResult<()> {
 
     #[pyfn(m)]
     fn url_to_bytes(location: &str, options: &Bound<'_, PyDict>) -> Result<Vec<u8>, PyErr> {
-        let options: HashMap<String, String> = options.extract()?; // cmk
+        let options: HashMap<String, String> = options.extract()?;
         let cloud_file = CloudFile::new_with_options(location, options)
             .map_err(|e| Box::new(BedErrorPlus::CloudFileError(e)))?;
         let rt = runtime::Runtime::new()?;
@@ -178,7 +178,7 @@ fn bed_reader(_py: Python<'_>, m: &Bound<'_, PyModule>) -> PyResult<()> {
 
     #[pyfn(m)]
     fn check_file_cloud(location: &str, options: &Bound<'_, PyDict>) -> Result<(), PyErr> {
-        let options: HashMap<String, String> = options.extract()?; // cmk
+        let options: HashMap<String, String> = options.extract()?;
         runtime::Runtime::new()?.block_on(async {
             BedCloud::new_with_options(location, options).await?;
             Ok(())
@@ -200,7 +200,7 @@ fn bed_reader(_py: Python<'_>, m: &Bound<'_, PyModule>) -> PyResult<()> {
         max_concurrent_requests: usize,
         max_chunk_bytes: usize,
     ) -> Result<(), PyErr> {
-        let options: HashMap<String, String> = options.extract()?; // cmk
+        let options: HashMap<String, String> = options.extract()?;
 
         let iid_index = iid_index.readonly();
         let sid_index = sid_index.readonly();
@@ -247,7 +247,7 @@ fn bed_reader(_py: Python<'_>, m: &Bound<'_, PyModule>) -> PyResult<()> {
         max_concurrent_requests: usize,
         max_chunk_bytes: usize,
     ) -> Result<(), PyErr> {
-        let options: HashMap<String, String> = options.extract()?; // cmk
+        let options: HashMap<String, String> = options.extract()?;
 
         let iid_index = iid_index.readonly();
         let sid_index = sid_index.readonly();
@@ -294,7 +294,7 @@ fn bed_reader(_py: Python<'_>, m: &Bound<'_, PyModule>) -> PyResult<()> {
         max_concurrent_requests: usize,
         max_chunk_bytes: usize,
     ) -> Result<(), PyErr> {
-        let options: HashMap<String, String> = options.extract()?; // cmk
+        let options: HashMap<String, String> = options.extract()?;
 
         let iid_index = iid_index.readonly();
         let sid_index = sid_index.readonly();

useful.md

@@ -4,7 +4,6 @@
 
 To get some Rust PyO3 debugging to work I had to set this before starting vscode:
 
-<!-- cmk -->
 ```cmd
 set PYO3_PYTHON=C:/Users/carlk/OneDrive/programs/bed-reader/.venv\Scripts\python.exe
 ```