Bump actions/checkout from 3 to 4 (#1103)

* Bump actions/checkout from 3 to 4

Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](actions/checkout@v3...v4)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>

* Fix permissions for publishing workflow (#1110)

---------

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Fernando Pérez-García <fepegar@gmail.com>

.github/workflows/code_quality.yml

@@ -21,7 +21,7 @@ jobs:
           python-version: "3.11"
 
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 0
 
@@ -42,7 +42,7 @@ jobs:
           python-version: "3.11"
 
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 0
 
@@ -63,7 +63,7 @@ jobs:
           python-version: "3.11"
 
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 0
 
@@ -84,7 +84,7 @@ jobs:
           python-version: "3.11"
 
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 0
 

.github/workflows/publish.yml

@@ -4,13 +4,17 @@ name: Publish
 
 on: push
 
+# https://github.com/fepegar/torchio/actions/runs/6076955855/job/17283217522?pr=1103
+permissions:
+  id-token: write
+
 jobs:
   Build-and-publish:
     name: Build and publish if needed
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
 
     - name: Set up Python 3.11
       uses: actions/setup-python@v4

.github/workflows/tests.yml

@@ -44,7 +44,7 @@ jobs:
           python-version: ${{ matrix.python-version }}
 
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 0
 
@@ -72,7 +72,7 @@ jobs:
           python-version: "3.11"
 
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 0