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Achievement: Pull Sharkx3Achievement: Pair Extraordinairex3Achievement: QuickdrawAchievement: StarstruckAchievement: Arctic Code Vault Contributor

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  1. mfumagalli/ngsTools Public

    Programs to analyse NGS data for population genetics purposes

    R 173 66

  2. ngsDist Public

    Estimation of pairwise distances under a probabilistic framework

    C++ 10 7

  3. ngsF-HMM Public

    Estimation of per-individual inbreeding tracts under a probabilistic framework

    C++ 14 6

  4. ngsF Public

    Estimation of per-individual inbreeding coefficients under a probabilistic framework

    C 20 8

  5. ngsLD Public

    Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework

    C++ 47 8

  6. prune_graph Public

    Fast prunning of graphs based on node weights

    Rust 1

714 contributions in the last year

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Contribution activity

April 2025

Created 2 commits in 1 repository

Created a pull request in snakemake/snakemake-wrappers that received 1 comment

feat: Add mmseqs2 main workflows

QC I confirm that I have followed the documentation for contributing to snakemake-wrappers. While the contributions guidelines are more extensi…

+694 −3 lines changed • 1 comment
Reviewed 3 pull requests in 2 repositories

Created an issue in samtools/samtools that received 9 comments

Merging breaks order for query but not coordinate sorting

I am merging several sorted BAM files with different headers and, ideally, I'd like for the sorting order to be preserved (to avoid re-sorting afte…

9 comments
Opened 3 other issues in 2 repositories
22 contributions in private repositories Apr 2 – Apr 10
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