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12 changes: 7 additions & 5 deletions docs/index.html
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Expand Up @@ -269,17 +269,19 @@ <h1 class="title">BioDIGS: Biosynthetic Gene Clusters</h1>
</div>
<div id="about-this-book" class="section level1 unnumbered hasAnchor">
<h1>About this Book<a href="index.html#about-this-book" class="anchor-section" aria-label="Anchor link to header"></a></h1>
<p>This is a companion training guide for BioDIGS, a GDSCN project that brings a research experience into the classroom. In this module, students will explore microbiome data for the presence of biosynthesis genes. They will run analyses using antiSMASH as implemented on Galaxy. Visit the BioDIGS (BioDiversity and Informatics for Genomics Scholars) website <a href="https://biodigs.org/">here</a> for more information about this collaborative, distributed research project, including how you can get involved!</p>
<p>This is a companion training guide for BioDIGS, a GDSCN project that brings a research experience into the classroom. In this module, students will explore <strong>microbiome data for the presence of biosynthesis genes</strong>. They will run analyses using <strong>antiSMASH as implemented on Galaxy</strong>.</p>
<p><img src="index_files/figure-html/1USiLPJZ21-47i_1dNXVMcVVb8rmswBCoUTIC8z8UG2Y_g2d459dad204_0_16.png" alt="Landing page for the Biosynthetic Gene Cluster Activity." width="60%" style="display: block; margin: auto;" /></p>
<p>Visit the BioDIGS (BioDiversity and Informatics for Genomics Scholars) website <a href="https://biodigs.org/">here</a> for more information about this collaborative, distributed research project, including how you can get involved!</p>
<p>The GDSCN (Genomics Data Science Community Network) is a consortium of educators who aim to create a world where researchers, educators, and students from diverse backgrounds are able to fully participate in genomic data science research. You can find more information about its mission and initiatives <a href="https://www.gdscn.org/home">here</a>.</p>
<p><img src="https://raw.githubusercontent.com/fhdsl/GDSCN_BioDIGS_Book/main/assets/GDSCN_style/logo_BioDIGS_final.png" alt="BioDIGS logo" width="300px" style="display: block; margin: auto;" /></p>
<div id="skills-level" class="section level2 hasAnchor" number="0.1">
<h2><span class="header-section-number">0.1</span> Skills Level<a href="index.html#skills-level" class="anchor-section" aria-label="Anchor link to header"></a></h2>
<p>The activities in this guide are written for undergraduate students and beginning graduate students.</p>
<div class="notice">
<p><em>Genetics</em>
<!-- **Beginner**: some genetics knowledge needed --></p>
<p><em>Programming skills</em>
<!-- **Novice**: no programming experience needed --></p>
<p><em>Genetics</em><br />
<strong>Beginner</strong>: some genetics knowledge needed</p>
<p><em>Programming skills</em><br />
<strong>Novice</strong>: no programming experience needed</p>
</div>
</div>
<div id="platform" class="section level2 hasAnchor" number="0.2">
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14 changes: 9 additions & 5 deletions docs/index.md
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Expand Up @@ -13,7 +13,11 @@ favicon: assets/GDSCN_style/gdscn_favicon.ico

# About this Book {-}

This is a companion training guide for BioDIGS, a GDSCN project that brings a research experience into the classroom. In this module, students will explore microbiome data for the presence of biosynthesis genes. They will run analyses using antiSMASH as implemented on Galaxy. Visit the BioDIGS (BioDiversity and Informatics for Genomics Scholars) website [here](https://biodigs.org/) for more information about this collaborative, distributed research project, including how you can get involved!
This is a companion training guide for BioDIGS, a GDSCN project that brings a research experience into the classroom. In this module, students will explore **microbiome data for the presence of biosynthesis genes**. They will run analyses using **antiSMASH as implemented on Galaxy**.

<img src="index_files/figure-html//1USiLPJZ21-47i_1dNXVMcVVb8rmswBCoUTIC8z8UG2Y_g2d459dad204_0_16.png" alt="Landing page for the Biosynthetic Gene Cluster Activity." width="60%" style="display: block; margin: auto;" />

Visit the BioDIGS (BioDiversity and Informatics for Genomics Scholars) website [here](https://biodigs.org/) for more information about this collaborative, distributed research project, including how you can get involved!

The GDSCN (Genomics Data Science Community Network) is a consortium of educators who aim to create a world where researchers, educators, and students from diverse backgrounds are able to fully participate in genomic data science research. You can find more information about its mission and initiatives [here](https://www.gdscn.org/home).

Expand All @@ -24,11 +28,11 @@ The GDSCN (Genomics Data Science Community Network) is a consortium of educators
The activities in this guide are written for undergraduate students and beginning graduate students.

::: {.notice}
_Genetics_
<!-- **Beginner**: some genetics knowledge needed -->
_Genetics_
**Beginner**: some genetics knowledge needed

_Programming skills_
<!-- **Novice**: no programming experience needed -->
_Programming skills_
**Novice**: no programming experience needed
:::

## Platform
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2 changes: 1 addition & 1 deletion docs/search_index.json

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