Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[auto] Update dependencies in poetry.lock #822

Merged
merged 1 commit into from
Aug 27, 2024
Merged

[auto] Update dependencies in poetry.lock #822

merged 1 commit into from
Aug 27, 2024

Conversation

tcompa
Copy link
Collaborator

@tcompa tcompa commented Aug 27, 2024

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 5 updates, 0 removals

  - Updating pyyaml (6.0.1 -> 6.0.2)
  - Updating zipp (3.19.2 -> 3.20.1)
  - Updating importlib-metadata (8.0.0 -> 8.4.0)
  - Updating dask (2024.7.0 -> 2024.8.0)
  - Updating array-api-compat (1.7.1 -> 1.8)

Writing lock file

Outdated dependencies before PR:

alabaster                     (!) 0.7.16              1.0.0              
app-model                     (!) 0.2.7               0.2.8              
array-api-compat                  1.7.1               1.8                
astropy                       (!) 6.0.1               6.1.2              
astropy-iers-data             (!) 0.2024.7.15.0.31.42 0.2024.8.26.0.31.57
attrs                         (!) 23.2.0              24.2.0             
babel                         (!) 2.15.0              2.16.0             
cellpose                      (!) 2.2.3               3.0.11             
cffi                          (!) 1.16.0              1.17.0             
cmake                         (!) 3.30.0              3.30.2             
dask                              2024.7.0            2024.8.1           
debugpy                       (!) 1.8.2               1.8.5              
docstring-parser                  0.15                0.16               
executing                     (!) 0.10.0              2.0.1              
fastremap                     (!) 1.14.2              1.15.0             
filelock                          3.13.4              3.15.4             
idna                          (!) 3.7                 3.8                
imageio                       (!) 2.34.2              2.35.1             
imageio-ffmpeg                (!) 0.4.9               0.5.1              
importlib-metadata                8.0.0               8.4.0              
ipython                       (!) 8.18.1              8.26.0             
ipywidgets                    (!) 8.1.3               8.1.5              
jupyterlab                    (!) 4.2.3               4.2.5              
jupyterlab-server             (!) 2.27.2              2.27.3             
jupyterlab-widgets            (!) 3.0.11              3.0.13             
jupytext                      (!) 1.16.3              1.16.4             
lxml                              4.9.4               5.3.0              
magicgui                      (!) 0.8.3               0.9.1              
matplotlib                    (!) 3.9.1               3.9.2              
napari                        (!) 0.5.0               0.5.2              
napari-skimage-regionprops    (!) 0.8.2               0.10.1             
napari-workflows              (!) 0.2.10              0.2.11             
networkx                      (!) 3.2.1               3.3                
npe2                          (!) 0.7.6               0.7.7              
numcodecs                         0.12.1              0.13.0             
numpy                             1.26.4              2.1.0              
numpydoc                      (!) 1.7.0               1.8.0              
nvidia-cublas-cu11            (!) 11.10.3.66          11.11.3.6          
nvidia-cuda-cupti-cu11        (!) 11.7.101            11.8.87            
nvidia-cuda-nvrtc-cu11        (!) 11.7.99             11.8.89            
nvidia-cuda-runtime-cu11      (!) 11.7.99             11.8.89            
nvidia-cudnn-cu11             (!) 8.5.0.96            9.3.0.75           
nvidia-curand-cu11            (!) 10.2.10.91          10.3.0.86          
nvidia-cusolver-cu11          (!) 11.4.0.1            11.4.1.48          
nvidia-cusparse-cu11          (!) 11.7.4.91           11.7.5.86          
nvidia-nccl-cu11              (!) 2.14.3              2.21.5             
nvidia-nvtx-cu11              (!) 11.7.91             11.8.86            
pandas                            1.5.3               2.2.2              
pooch                         (!) 1.8.0               1.8.2              
pure-eval                     (!) 0.2.2               0.2.3              
pycodestyle                   (!) 2.12.0              2.12.1             
pydantic-core                     2.20.1              2.23.0             
pyparsing                     (!) 3.1.2               3.1.4              
pytest                        (!) 7.4.4               8.3.2              
pyyaml                            6.0.1               6.0.2              
pyzmq                         (!) 26.0.3              26.2.0             
rich                          (!) 13.7.1              13.8.0             
rpds-py                       (!) 0.19.0              0.20.0             
scipy                             1.13.1              1.14.1             
setuptools                        70.3.0              73.0.1             
soupsieve                     (!) 2.5                 2.6                
sphinx                        (!) 7.4.4               8.0.2              
sphinxcontrib-applehelp       (!) 1.0.8               2.0.0              
sphinxcontrib-devhelp         (!) 1.0.6               2.0.0              
sphinxcontrib-htmlhelp        (!) 2.0.5               2.1.0              
sphinxcontrib-qthelp          (!) 1.0.7               2.0.0              
sphinxcontrib-serializinghtml (!) 1.1.10              2.0.0              
stack-data                    (!) 0.5.1               0.6.3              
stackview                     (!) 0.8.0               0.8.2              
sympy                         (!) 1.13.0              1.13.2             
tifffile                      (!) 2024.7.2            2024.8.24          
torch                         (!) 2.0.0               2.4.0              
tqdm                          (!) 4.66.4              4.66.5             
triton                        (!) 2.0.0               3.0.0              
typer                         (!) 0.12.3              0.12.5             
types-python-dateutil         (!) 2.9.0.20240316      2.9.0.20240821     
webcolors                     (!) 24.6.0              24.8.0             
wheel                         (!) 0.43.0              0.44.0             
widgetsnbextension            (!) 4.0.11              4.0.13             
zipp                              3.19.2              3.20.1             

Outdated dependencies after PR:

alabaster                  (!) 0.7.16     1.0.0     A light, configurable Sp...
astropy                    (!) 6.0.1      6.1.2     Astronomy and astrophysi...
cellpose                   (!) 2.2.3      3.0.11    anatomical segmentation ...
dask                           2024.8.0   2024.8.1  Parallel PyData with Tas...
docstring-parser               0.15       0.16      Parse Python docstrings ...
executing                  (!) 0.10.0     2.0.1     Get the currently execut...
filelock                       3.13.4     3.15.4    A platform independent f...
imageio-ffmpeg             (!) 0.4.9      0.5.1     FFMPEG wrapper for Python
ipython                    (!) 8.18.1     8.26.0    IPython: Productive Inte...
lxml                           4.9.4      5.3.0     Powerful and Pythonic XM...
napari-skimage-regionprops (!) 0.8.2      0.10.1    A regionprops table widg...
networkx                   (!) 3.2.1      3.3       Python package for creat...
numcodecs                      0.12.1     0.13.0    A Python package providi...
numpy                          1.26.4     2.1.0     Fundamental package for ...
nvidia-cublas-cu11         (!) 11.10.3.66 11.11.3.6 CUBLAS native runtime li...
nvidia-cuda-cupti-cu11     (!) 11.7.101   11.8.87   CUDA profiling tools run...
nvidia-cuda-nvrtc-cu11     (!) 11.7.99    11.8.89   NVRTC native runtime lib...
nvidia-cuda-runtime-cu11   (!) 11.7.99    11.8.89   CUDA Runtime native Libr...
nvidia-cudnn-cu11          (!) 8.5.0.96   9.3.0.75  cuDNN runtime libraries
nvidia-curand-cu11         (!) 10.2.10.91 10.3.0.86 CURAND native runtime li...
nvidia-cusolver-cu11       (!) 11.4.0.1   11.4.1.48 CUDA solver native runti...
nvidia-cusparse-cu11       (!) 11.7.4.91  11.7.5.86 CUSPARSE native runtime ...
nvidia-nccl-cu11           (!) 2.14.3     2.21.5    NVIDIA Collective Commun...
nvidia-nvtx-cu11           (!) 11.7.91    11.8.86   NVIDIA Tools Extension
pandas                         1.5.3      2.2.2     Powerful data structures...
pooch                      (!) 1.8.0      1.8.2     "Pooch manages your Pyth...
pydantic-core                  2.20.1     2.23.0    Core functionality for P...
pytest                     (!) 7.4.4      8.3.2     pytest: simple powerful ...
scipy                          1.13.1     1.14.1    Fundamental algorithms f...
sphinx                     (!) 7.4.7      8.0.2     Python documentation gen...
stack-data                 (!) 0.5.1      0.6.3     Extract data from python...
torch                      (!) 2.0.0      2.4.0     Tensors and Dynamic neur...
triton                     (!) 2.0.0      3.0.0     A language and compiler ...

Note: there may be dependencies in the table above which were not updated as part of this PR.
The reason is they require manual updating due to the way they are pinned.

Copy link

Coverage report

This PR does not seem to contain any modification to coverable code.

@tcompa tcompa marked this pull request as ready for review August 27, 2024 10:24
@tcompa tcompa merged commit 6cb2e51 into main Aug 27, 2024
19 checks passed
@tcompa tcompa deleted the poetry-update branch August 27, 2024 10:24
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant