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13 Open 56 Closed
13 Open 56 Closed
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Issues list

Recommended citation
#114 opened Jul 30, 2022 by agitter
1
Node names missing in dataframe from get_networkx_graph_as_dataframe_of_edges
#113 opened Apr 1, 2021 by agitter
Document parameter gamma (self.params.g) in the code, and re-generate docs
#112 opened Mar 25, 2021 by alexlenail
1
Numeric arguments in __main__.py stored as list
#111 opened Mar 25, 2021 by agitter
TypeError: pcst_fast(): incompatible function arguments
#110 opened Mar 25, 2021 by agitter
8
Initialization parameters not used in grid search
#108 opened Feb 23, 2021 by iamjli
Improve runtime of PCSF by unrooting PCST difficulty: intermediate
#98 opened Feb 22, 2019 by iamjli
@iamjli
7
Make it possible to root PCSF at a particular node difficulty: easy
#89 opened Jun 20, 2018 by alexlenail
@alexlenail
Move to python3.6 f-strings consistently across codebase difficulty: easy
#88 opened Jun 19, 2018 by alexlenail
@alexlenail
1
Finish tests for OmicsIntegrator "Results" methods difficulty: intermediate
#87 opened Jun 19, 2018 by alexlenail
@iamjli
Ernest: Avoid parameter selection by randomize & merge difficulty: hard
#56 opened Oct 19, 2017 by alexlenail
Ernest: Ranking subnetworks difficulty: intermediate
#55 opened Oct 19, 2017 by alexlenail
@alexlenail
Add mRNA nodes & interactions to forest difficulty: intermediate
#33 opened Jun 20, 2017 by AmandaKedaigle
@AmandaKedaigle
5
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