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@ftdc-picsl

Penn FTDC-PICSL group

Collaborative projects from the FTD Center and PICSL lab http://ftd.med.upenn.edu/our-center

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  1. antsnetct antsnetct Public

    Cortical thickness with ANTsPyNet

    Python

  2. pmacsPreps pmacsPreps Public

    *prep wrapper scripts for the PMACS cluster

    Shell 1

  3. QuANTs QuANTs Public

    Quality control, quantifying regional values, and querying of ANTs output

    Python

  4. antsct-aging antsct-aging Public

    ANTs cortical thickness pipeline container, contains a template for older individuals

    Perl 1 2

  5. T1wPreprocessing T1wPreprocessing Public

    Container for pre-processing T1w data before running structural analyses

    Python

  6. penn-pet penn-pet Public

    Development of a basic brain PET processing pipeline for the UPenn community

    Shell 3

Repositories

Showing 10 of 32 repositories
  • pmacsT1wPreprocessing Public

    Wrapper to run T1wPreprocessing container on the LPC

    ftdc-picsl/pmacsT1wPreprocessing’s past year of commit activity
    Shell 0 0 0 0 Updated Mar 3, 2025
  • T1wPreprocessing Public

    Container for pre-processing T1w data before running structural analyses

    ftdc-picsl/T1wPreprocessing’s past year of commit activity
    Python 0 0 0 0 Updated Feb 21, 2025
  • antsnetct Public

    Cortical thickness with ANTsPyNet

    ftdc-picsl/antsnetct’s past year of commit activity
    Python 0 Apache-2.0 0 4 0 Updated Feb 20, 2025
  • pmacsANTsPyNet Public

    Framework for running ANTsPyNet tools on the PMACS LPC

    ftdc-picsl/pmacsANTsPyNet’s past year of commit activity
    Python 0 0 0 0 Updated Feb 14, 2025
  • antsct-aging Public

    ANTs cortical thickness pipeline container, contains a template for older individuals

    ftdc-picsl/antsct-aging’s past year of commit activity
    Perl 1 Apache-2.0 2 0 0 Updated Feb 3, 2025
  • bstat Public

    A simple wrapper for more informative bjobs output

    ftdc-picsl/bstat’s past year of commit activity
    Shell 0 Apache-2.0 0 0 0 Updated Dec 19, 2024
  • penn-pet Public

    Development of a basic brain PET processing pipeline for the UPenn community

    ftdc-picsl/penn-pet’s past year of commit activity
    Shell 0 BSD-3-Clause 3 0 0 Updated Nov 8, 2024
  • pmacsPreps Public

    *prep wrapper scripts for the PMACS cluster

    ftdc-picsl/pmacsPreps’s past year of commit activity
    Shell 0 MIT 1 0 0 Updated Nov 7, 2024
  • pmacsAntsnetct Public

    Wrapper for submitting antsnetct jobs on the PMACS cluster

    ftdc-picsl/pmacsAntsnetct’s past year of commit activity
    Shell 0 0 0 0 Updated Oct 7, 2024
  • QuANTs Public

    Quality control, quantifying regional values, and querying of ANTs output

    ftdc-picsl/QuANTs’s past year of commit activity
    Python 0 0 5 0 Updated Oct 6, 2024
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