minor black formatting and configuration changes

gunpowder/nodes/batch_provider.py

@@ -174,7 +174,6 @@ def request_batch(self, request):
         batch = None
 
         try:
-
             self.set_seeds(request)
 
             logger.debug("%s got request %s", self.name(), request)

gunpowder/nodes/deform_augment.py

@@ -130,7 +130,6 @@ def setup(self):
             self.provides(self.transform_key, spec)
 
     def prepare(self, request):
-
         # get the total ROI of all requests
         total_roi = request.get_total_roi()
         logger.debug("total ROI is %s" % total_roi)

gunpowder/nodes/elastic_augment.py

@@ -124,7 +124,6 @@ def __init__(
         self.recompute_missing_points = recompute_missing_points
 
     def prepare(self, request):
-
         # get the voxel size
         self.voxel_size = self.__get_common_voxel_size(request)
 

gunpowder/nodes/noise_augment.py

@@ -57,13 +57,11 @@ def process(self, batch, request):
         seed = request.random_seed
 
         try:
-
             raw.data = skimage.util.random_noise(
                 raw.data, mode=self.mode, rng=seed, clip=self.clip, **self.kwargs
             ).astype(raw.data.dtype)
 
         except ValueError:
-
             # legacy version of skimage random_noise
             raw.data = skimage.util.random_noise(
                 raw.data, mode=self.mode, seed=seed, clip=self.clip, **self.kwargs

gunpowder/nodes/random_location.py

@@ -172,7 +172,6 @@ def setup(self):
             self.provides(self.random_shift_key, ArraySpec(nonspatial=True))
 
     def prepare(self, request):
-
         logger.debug("request: %s", request.array_specs)
         logger.debug("my spec: %s", self.spec)
 

gunpowder/nodes/random_provider.py

@@ -69,7 +69,6 @@ def setup(self):
             self.provides(self.random_provider_key, ArraySpec(nonspatial=True))
 
     def provide(self, request):
-
         if self.random_provider_key is not None:
             del request[self.random_provider_key]
 

gunpowder/nodes/reject.py

@@ -55,7 +55,6 @@ def setup(self):
         self.upstream_provider = self.get_upstream_provider()
 
     def provide(self, request):
-
         report_next_timeout = 10
         num_rejected = 0
 

gunpowder/nodes/shift_augment.py

@@ -24,7 +24,6 @@ def __init__(self, prob_slip=0, prob_shift=0, sigma=0, shift_axis=0):
         self.lcm_voxel_size = None
 
     def prepare(self, request):
-
         self.ndim = request.get_total_roi().dims
         assert self.shift_axis in range(self.ndim)
 

gunpowder/nodes/simple_augment.py

@@ -106,7 +106,6 @@ def setup(self):
                     self.permutation_dict[k] = v
 
     def prepare(self, request):
-
         self.mirror = [
             random.random() < self.mirror_probs[d] if self.mirror_mask[d] else 0
             for d in range(self.dims)

gunpowder/nodes/stack.py

@@ -25,7 +25,6 @@ def __init__(self, num_repetitions):
         self.num_repetitions = num_repetitions
 
     def provide(self, request):
-
         batches = []
         for _ in range(self.num_repetitions):
             upstream_request = request.copy()

pyproject.toml

@@ -70,7 +70,7 @@ full = [
 version = { attr = "gunpowder.version_info.__version__" }
 
 [tool.black]
-target_version = ['py36', 'py37', 'py38', 'py39', 'py310']
+target_version = ['py38', 'py39', 'py310']
 
 [tool.setuptools.packages.find]
 include = ["gunpowder*"]