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3D CNN prostate cancer predictor throught multiparametric magnetic resonance imaging (MRI).

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Prostate cancer predictor

Prostate cancer predictor throught multiparametric magnetic resonance imaging (MRI).

Execution order

  1. Export_dataset.ipynb: Read files and manage their information in dataframes. Save and export the dataframe using the pickle library.
  2. Manage_dataset.ipynb: Load the pickle file with dataset information, then manage and clean the dataset (manage MRI's slices). Save and export the dataframe using the pickle library.
  3. Training_notebook_all_MRIs.ipynb: Load the pickle file with clean dataset and train a 3D convolutional neural network (CNN) for each MRI type.
  4. Test_models.ipynb: Test the trainen model.

Dataset

The dataset was obtained from PROSTATEx challenge

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3D CNN prostate cancer predictor throught multiparametric magnetic resonance imaging (MRI).

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