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Add more notes on product deployments and chart installations
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nuwang committed Feb 20, 2024
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Expand Up @@ -34,18 +34,40 @@ helm upgrade --install ingress-nginx ingress-nginx \
This chart relies on the features of other charts for common functionality:
- [postgres-operator](https://github.com/zalando/postgres-operator) for the
database;
- [CSI-S3 chart](https://github.com/ctrox/csi-s3/pull/75/) for linking the
reference data to Galaxy and jobs based on S3FS.
- [galaxy-cvmfs-csi](https://github.com/CloudVE/galaxy-cvmfs-csi-helm) for linking the
reference data to Galaxy and jobs based on CVMFS (default).
- [csi-s3](https://github.com/ctrox/csi-s3/pull/75/) for linking
reference data to Galaxy and jobs based on S3FS (optional/alternative to CVMFS).
- [rabbitmq-cluster-operator](https://github.com/rabbitmq/cluster-operator) for deploying
the message queue.

In a production setting, especially if the intention is to run multiple Galaxies
in a single cluster, we recommend installing the dependency charts separately
once per cluster, and installing Galaxy with `--set postgresql.deploy=false
--set s3csi.deploy=false`.
--set s3csi.deploy=false --set cvmfs.deploy=false --set rabbitmq.deploy=false`.

---

## Installing the chart

### Using the chart from the packaged chart repo

1. The chart is automatically packaged, versioned and uploaded to a helm repository
on each accepted PR. Therefore, the latest version of the chart can be downloaded
from this repository.

```console
helm repo add cloudve https://raw.githubusercontent.com/CloudVE/helm-charts/master/
helm repo update
```

2. Install the chart with the release name `my-galaxy`. It is not advisable to
install Galaxy in the `default` namespace.

```console
helm install my-galaxy-release cloudve/galaxy
```

### Using the chart from GitHub repo

1. Clone this repository and add required dependency charts:
Expand All @@ -68,25 +90,6 @@ In several minute, Galaxy will be available at `/galaxy/` URL of your Kubernetes
cluster. If you are running the development Kubernetes, Galaxy will be available
at `http://localhost/galaxy/` (note the trailing slash).

### Using the chart from the packaged chart repo

1. Instead of using the source code repo, you can install the packaged version
of the chart and hence not need to clone this GitHub repo. The packaged version
may contain a bit older but possibly more stable code than what is the GitHub
repo at any a given point in time.

```console
helm repo add cloudve https://raw.githubusercontent.com/CloudVE/helm-charts/master/
helm repo update
```

2. Install the chart with the release name `my-galaxy`. It is not advisable to
install Galaxy in the `default` namespace.

```console
helm install my-galaxy-release cloudve/galaxy
```

## Uninstalling the chart

To uninstall/delete the `my-galaxy` deployment, run:
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