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v24.0.1

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@mvdbeek mvdbeek released this 02 May 10:28
· 3849 commits to dev since this release
592cf1e

What's Changed

  • [24.0] Fix hasOwner function for histories in client by @ahmedhamidawan in #17886
  • [23.2] Added 4dn_pairs and 4dn_pairsam datatypes by @SaimMomin12 in #17875
  • [24.0] Always serialize element_count and populated when listing contents by @mvdbeek in #17890
  • [24.0] Fix release notes by @jdavcs in #17894
  • [24.0] Make wait_for_history_jobs look at jobs, not datasets by @mvdbeek in #17892
  • [24.0] Fix deadlock that can occur when changing job state by @mvdbeek in #17896
  • [24.0] Fix search and version menu in docs by @nsoranzo in #17898
  • [24.0] Fix conditional Image imports by @mvdbeek in #17899
  • [24.0] Fix workflow run form failing on certain histories by @mvdbeek in #17869
  • [23.2] Fix saving workflows with freehand_comments only by @mvdbeek in #17901
  • [24.0] do not show copy button when editing by @martenson in #17895
  • [24.0] Do not save workflow on Run without user confirmation by @ahmedhamidawan in #17907
  • [24.0] Rebuild config samples by @davelopez in #17911
  • [24.0] Fix lost reports when switching workflow versions by @mvdbeek in #17904
  • [24.0] Make sure step removal also resets mapOver state by @mvdbeek in #17915
  • [23.2] Adjust update_cwl_conformance_tests.sh for removed branch by @mvdbeek in #17916
  • [24.0] Adjust release notes to use the same language as interface by @martenson in #17919
  • [24.0] Fix saving user preferences crashes tab by @ElectronicBlueberry in #17917
  • [24.0] Always discard session after __handle_waiting_jobs is done by @mvdbeek in #17913
  • [24.0] Fix workflow run form for workflows with null rename PJA by @mvdbeek in #17929
  • [24.0] Fix tool form building if select filters from unavailable dataset metadata by @mvdbeek in #17930
  • [24.0] Fix InvalidRequestError: Can't operate on closed transaction inside context manager. Please complete the context manager before emitting further commands. by @mvdbeek in #17932
  • [24.0] Never fail dataset serialization if display_peek fails by @mvdbeek in #17937
  • [24.0] Drop left-over debug statement by @mvdbeek in #17939
  • [23.0] Fix output datatype when uncompressing a dataset with incorrect datatype by @nsoranzo in #17944
  • [24.0] Fix tool version switch in editor by @mvdbeek in #17858
  • [23.2] Fix missing implicit conversion for mapped over jobs by @mvdbeek in #17952
  • [23.0] Fix KeyError in XForwardedHostMiddleware by @nsoranzo in #17955
  • [24.0] Revert unnecessary error change by @mvdbeek in #17948
  • [24.0] Fix notification display time by @davelopez in #17965
  • [23.2] Fix message input type for notifications in admin panel by @davelopez in #17966
  • [23.2] Set from_tool_form: true when saving new workflow by @mvdbeek in #17972
  • [24.0] Update _thanks.rst in the User Release Notes to include new socials and remove inactive ones by @natwhitaker in #17971
  • [24.0] Show dataset image in workflow_outputs display listing. by @dannon in #17964
  • [24.0] Fix filtering workflow outputs by type in markdown directives by @davelopez in #17977
  • [24.0] Fix get_content_as_text for compressed text datatypes by @mvdbeek in #17976
  • [24.0] History import - show user feedback on completion. by @dannon in #17980
  • [24.0] Backport: Fix bug: call unique() on result, not select stmt by @jdavcs in #17981
  • [24.0] Fix LengthValidator if no value passed by @mvdbeek in #17983
  • [24.0] Raise RequestParameterInvalidException if collection element has unknown extension by @mvdbeek in #17985
  • [24.0] Use or copy StoredWorkflow when copying step by @mvdbeek in #17988
  • [23.2] Don't attempt to commit in dry_run mode by @mvdbeek in #17987
  • [23.2] Invenio plugin fixes by @davelopez in #17997
  • [24.0] Update prebuilt client by @dannon in #18000
  • [24.0] Preserve surrounding whitespace when localizing complex nodes by @dannon in #18005
  • [24.0] Use the new column-select component in FormData for multiple select by @ahmedhamidawan in #17990
  • [24.0] Don't fail if reporting invalid parameter values by @mvdbeek in #18002
  • [24.0] Raise MessageException when report references invalid workflow output by @mvdbeek in #18009
  • [24.0] Include exception info when something goes wrong while refreshing tokens by @mvdbeek in #18008
  • [24.0] Reduce notifications polling frequency by @davelopez in #18010
  • [24.0] Avoid exception when opening apply rules tool and no collection in history by @mvdbeek in #18011
  • [24.0] Don't commit without having set a hid by @mvdbeek in #18014
  • [24.0] Add a link to histories list in history import message for situations… by @dannon in #18021
  • [24.0] Fix test_get_tags_histories_content test by @mvdbeek in #18026
  • [24.0] Fix tag regex pattern by @jdavcs in #18025
  • [24.0] Backport colabfold tar file datatype by @mvdbeek in #18029
  • [24.0] Fix remote files sources error handling by @davelopez in #18027
  • [24.0] Raise appropriate exception if user forces a collection that is not populated with elements as input by @mvdbeek in #18023
  • [24.0] Change wrong quota_source value from KeyError to ValueError by @mvdbeek in #18040
  • [24.0] Fix History Dataset Association creation so that hid is always set by @mvdbeek in #18036
  • [24.0] Ensure that offset and limit are never negative by @mvdbeek in #18044
  • [24.0] clarify the object store relocate functionality by @martenson in #18033
  • [24.0] Add middleware for logging start and end of request by @mvdbeek in #18046
  • [23.2] Updated the datatypes name for FASTK tool by @SaimMomin12 in #18053
  • [24.0] Fix comments lost on import by @ElectronicBlueberry in #18060
  • [24.0] Fix history export with missing dataset hids by @davelopez in #18052
  • [24.0] Check database connection to issue a rollback if no connection by @jdavcs in #18070
  • [24.0] Fix history update time after bulk operation by @davelopez in #18068

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Full Changelog: v24.0.0...v24.0.1