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Issues list

Add new peptideshaker/searchui version.
#5 opened Jan 24, 2015 by bgruening updated Jan 24, 2015
@bgruening
Add citations to all tools
#2 opened Jan 24, 2015 by bgruening updated Jan 24, 2015
2 of 19 tasks
1
move "convert windows newlines" tool into an other place
#9 opened Jan 24, 2015 by bgruening updated Jan 25, 2015
1
ProteinPilot has datatypes defined
#8 opened Jan 24, 2015 by bgruening updated Jan 25, 2015
2
msconvert for Wiff
#23 opened Mar 3, 2015 by jj-umn updated Mar 3, 2015
4
unipept "advanced missed cleavage" support
#29 opened Apr 9, 2015 by jj-umn updated Apr 9, 2015
2
Integrate the OpenSWATH into Galaxy
#10 opened Jan 24, 2015 by bgruening updated Apr 14, 2015
7 of 9 tasks
11
Add format argument to feature_alignment
#35 opened May 23, 2015 by bgruening updated May 23, 2015
@jj-umn
PIA - Protein Inference Algorithms
#85 opened Nov 9, 2016 by bgruening updated Nov 9, 2016
2
planemo lint all the tools Codefest
#92 opened Dec 7, 2016 by bgruening updated Dec 7, 2016
2
MSqRob - Robust statistical inference for quantitative LC-MS proteomics. Codefest Tool needed
#90 opened Nov 16, 2016 by bgruening updated Dec 7, 2016
DIA Swath Workflow
#66 opened Jul 6, 2016 by jj-umn updated Dec 7, 2016
1
Moving ProteinPilot datatypes to proteomics-datatypes? Codefest
#36 opened May 23, 2015 by bgruening updated Dec 7, 2016
DIAMOND and MEGAN6 input
#97 opened Dec 14, 2016 by PratikDJagtap updated Dec 15, 2016
2
Functional analysis of (meta)proteomics datasets
#89 opened Nov 15, 2016 by bmesuere updated Dec 15, 2016
8
readme should be extended
#104 opened Dec 16, 2016 by bgruening updated Dec 16, 2016
@PratikDJagtap
Metaproteomic public repositories (from Protein database downloader)
#87 opened Nov 10, 2016 by PratikDJagtap updated Dec 16, 2016
7
Metagenomic sequence processing
#106 opened Dec 16, 2016 by alessandrotanca updated Dec 16, 2016
1
Omega2 & Sipros3 (Metagenome Assembly & Metaproteome ID/Quant)
#88 opened Nov 12, 2016 by jhervey4 updated Dec 16, 2016
6
Generating proteomic databases from 16S rRNA / taxonomy data.
#86 opened Nov 10, 2016 by PratikDJagtap updated Dec 16, 2016
15
mz_to_sqlite needs a conda package Codefest
#77 opened Nov 6, 2016 by bgruening updated Dec 28, 2016
5
DeNovoGUI
#116 opened Jan 18, 2017 by Stortebecker updated Jan 18, 2017
Crying for help - TPP needs a conda package
#108 opened Dec 18, 2016 by bgruening updated Apr 21, 2017
8
unipept HTTP Error 500
#191 opened Aug 25, 2017 by bernt-matthias updated Aug 25, 2017
1
unipept accepts only tabular
#194 opened Aug 29, 2017 by bernt-matthias updated Aug 29, 2017
4
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