[2.1.1.post2] - 2021-11-23

Fixed

• Interface break when requesting all probe candidates.

[2.1.1.post1] - 2021-11-23

Fixed

• Now using version flag from importlib.

[2.1.1] - 2021-11-23

Fixed

• Output directory error via GUI due to changed CLI hook call structure after switching
  from argparse to click.

[2.1.0.post1]

Fixed

• Trove classifiers in pyproject.toml.

[2.1.0] - 2021-10-20

Added

• Pre-commit hooks.

Changed

• Import of custom routes script with importlib.util.
• Updated dependencies.
• Dropped support for Python 3.6.

Fixed

• Typo in GUI via ifpd serve.
• Typos in GUI.
• Alternative tab switcher of probe-design GUI.

[2.0.5] - 2021-02-22

Added

• poetry.lock file for common dependency versions.
• Logging commands submitted to queue via ifpd serve.

Changed

• Upgraded dependencies to latest versions and tested.

Fixed

• Minor bug in ifpd_mkdb triggered by databases with 1 oligo in a feature. (unlikely scenario)
• Bug in ifpd_serve that added quotes around --region start end and caused queries to fail.

[2.0.4] - 2021-02-11

Added

• Tooltip to GUI explaining that setting start and end to the same value triggers a query of the whole feature.
• const.py module with package version tag and other constants.
• Option to hide breadcrumbs when running serve.
• Enforcing GUI to be accessed at serving URI, not viewing one.

Changed

• Switched from setup.py to poetry setup.
• Simplified authorship and license comment.
• Now all scripts are accessible through a single entry-point at "ifpd".
• Now asking for arguments "chrom [--region start end]" when querying.
• Single probe design default behavior now does not stop if not enough oligos are found, instead it generates a probe with the largest number of oligos. To revert to the old behavior use the --exact-n-oligo option.
• Changed extension of simple template files to .tpl.html.
• Moved documentation to docs.
• mkdb does not support sequence-less inputs anymore.
• query probe and query set argument order changed.
• Made static argument mandatory for serve, for compatibility with pipx installation.
• Error 500 now triggers a redirect to app homepage with a 5s delay.
• Breadcrumbs are on by default on serve.

Fixed

• Blacked code.
• Bugs crashing query when probe has 1 or 2 oligos only.
• Bugs crashing query when probe set has 1 or 2 probes only.

Removed

• web module and all network-based checks.
• Network-based checks from dbchk.
• Dependency from ggc and tqdm.
• Sequence-less databases due to bug.

[2.0.3.post2] - 2019-09-11

Fixed

• Bug crashing web interface due to missing str2int conversion.

[2.0.3.post1] - 2019-07-24

Fixed

• Bug crashing interface when no CUSTOM flags are present in a database.

[2.0.3] - 2019-05-29

Added

• Option to easily add google analytics tokens to design interface.

Fixed

• Showing all probe candidates when using -1 option.