Fixed wrong variable name.

ggirelli · Aug 22, 2018 · c2af00f · c2af00f
1 parent 85e146d
commit c2af00f
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Showing 2 changed files with 4 additions and 3 deletions.
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -44,6 +44,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.
 ### Fixed
 - `gpseq_anim`
     + Crash when 2D mask folder is not provided.
+    + Wrong variable name in `anim.series.Series`.
 
 ### Removed
 - `gpseq_fromfish`

diff --git a/pygpseq/anim/series.py b/pygpseq/anim/series.py
@@ -288,10 +288,10 @@ def find_nuclei(self, **kwargs):
 
         # Save mask
         log += self.printout('Saving series object mask...', 2)
-        if 1 == np.max(imbin):
-            L = label(imbin)
+        if 1 == np.max(mask):
+            L = label(mask)
         else:
-            L = imbin
+            L = mask
 
         # Export binary mask as TIF
         if not type(None) == type(mask_tiff_dir) and not already_segmented: