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Hide signac-flow progress output.
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@joaander
joaander committed Oct 31, 2023
1 parent b58fe82 commit ad642a5
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1 change: 1 addition & 0 deletions 05-Organizing-and-Executing-Simulations/.gitignore
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dataspace
signac.rc
.signac
47 changes: 34 additions & 13 deletions 05-Organizing-and-Executing-Simulations/01-Organizing-Data.ipynb
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"metadata": {},
"source": [
"A **signac** project represents the entire **data space** stored on disk with associated metadata.\n",
"The method `init_project` creates a **signac** project in the *current working directory* by placing a `signac.rc` file with the project metadata and a `workspace` directory to hold the **directories** of the **data space**. The `name` argument is required with **signac** 1.x, but the value of the name is used only to populate `signac.rc`.\n",
"The method `init_project` creates a **signac** project in the *current working directory* by placing a `.signac/config` file with the project metadata and a `workspace` directory to hold the **directories** of the **data space**.\n",
"\n",
"Create the project:"
]
Expand All @@ -154,13 +154,29 @@
"name": "stdout",
"output_type": "stream",
"text": [
"project = None\n",
"schema_version = 1\n"
"schema_version = 2\n"
]
}
],
"source": [
"!cat signac.rc"
"!cat .signac/config"
]
},
{
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"execution_count": 7,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\n"
]
}
],
"source": [
"!ls -l workspace"
]
},
{
Expand All @@ -172,7 +188,7 @@
},
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"execution_count": 8,
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},
{
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"execution_count": 9,
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"outputs": [
{
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"{'N_particles': 128, 'volume_fraction': 0.6, 'seed': 20}"
]
},
"execution_count": 8,
"execution_count": 9,
"metadata": {},
"output_type": "execute_result"
}
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},
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"metadata": {},
"outputs": [
{
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"{}"
]
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"execution_count": 9,
"execution_count": 10,
"metadata": {},
"output_type": "execute_result"
}
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{
Expand Down Expand Up @@ -362,6 +378,11 @@
}
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Expand All @@ -372,7 +393,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.11.2"
"version": "3.11.6"
},
"record_timing": false
},
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155 changes: 21 additions & 134 deletions 05-Organizing-and-Executing-Simulations/02-Executing-Simulations.ipynb
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"execution_count": 7,
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"output_type": "stream",
Expand All @@ -331,6 +269,7 @@
"project = Project()\n",
"project.print_status(overview=False,\n",
" detailed=True,\n",
" hide_progress=True,\n",
" parameters=['volume_fraction'])"
]
},
Expand Down Expand Up @@ -368,13 +307,16 @@
"output_type": "stream",
"text": [
"workspace/59363805e6f46a715bc154b38dffc4e4:\n",
"lattice.gsd random.gsd signac_job_document.json signac_statepoint.json\n",
"lattice.gsd signac_job_document.json\n",
"random.gsd signac_statepoint.json\n",
"\n",
"workspace/972b10bd6b308f65f0bc3a06db58cf9d:\n",
"lattice.gsd random.gsd signac_job_document.json signac_statepoint.json\n",
"lattice.gsd signac_job_document.json\n",
"random.gsd signac_statepoint.json\n",
"\n",
"workspace/c1a59a95a0e8b4526b28cf12aa0a689e:\n",
"lattice.gsd random.gsd signac_job_document.json signac_statepoint.json\n"
"lattice.gsd signac_job_document.json\n",
"random.gsd signac_statepoint.json\n"
]
}
],
Expand All @@ -394,68 +336,6 @@
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{
"name": "stdout",
"output_type": "stream",
Expand All @@ -478,6 +358,7 @@
"source": [
"project.print_status(overview=False,\n",
" detailed=True,\n",
" hide_progress=True,\n",
" parameters=['volume_fraction'])"
]
},
Expand Down Expand Up @@ -514,16 +395,16 @@
"output_type": "stream",
"text": [
"workspace/59363805e6f46a715bc154b38dffc4e4:\n",
"compressed.gsd\trandom.gsd\t\t signac_statepoint.json\n",
"lattice.gsd\tsignac_job_document.json\n",
"compressed.gsd random.gsd signac_statepoint.json\n",
"lattice.gsd signac_job_document.json\n",
"\n",
"workspace/972b10bd6b308f65f0bc3a06db58cf9d:\n",
"compressed.gsd\trandom.gsd\t\t signac_statepoint.json\n",
"lattice.gsd\tsignac_job_document.json\n",
"compressed.gsd random.gsd signac_statepoint.json\n",
"lattice.gsd signac_job_document.json\n",
"\n",
"workspace/c1a59a95a0e8b4526b28cf12aa0a689e:\n",
"compressed.gsd\trandom.gsd\t\t signac_statepoint.json\n",
"lattice.gsd\tsignac_job_document.json\n"
"compressed.gsd random.gsd signac_statepoint.json\n",
"lattice.gsd signac_job_document.json\n"
]
}
],
Expand Down Expand Up @@ -559,6 +440,11 @@
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3 (ipykernel)",
"language": "python",
"name": "python3"
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"codemirror_mode": {
"name": "ipython",
Expand All @@ -568,7 +454,8 @@
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"pygments_lexer": "ipython3",
"version": "3.11.6"
},
"record_timing": false
},
Expand Down
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