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Bump the pip-version group across 1 directory with 6 updates #67

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Bumps the pip-version group with 6 updates in the / directory:

Package From To
numpy 2.0.1 2.1.2
pymongo 4.8.0 4.10.1
redis 5.0.8 5.2.0
zarr 2.18.2 2.18.3
coverage 7.6.0 7.6.4
pytest 8.3.2 8.3.3

Updates numpy from 2.0.1 to 2.1.2

Release notes

Sourced from numpy's releases.

2.1.2 (Oct 5, 2024)

NumPy 2.1.2 Release Notes

NumPy 2.1.2 is a maintenance release that fixes bugs and regressions discovered after the 2.1.1 release.

The Python versions supported by this release are 3.10-3.13.

Contributors

A total of 11 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

  • Charles Harris
  • Chris Sidebottom
  • Ishan Koradia +
  • João Eiras +
  • Katie Rust +
  • Marten van Kerkwijk
  • Matti Picus
  • Nathan Goldbaum
  • Peter Hawkins
  • Pieter Eendebak
  • Slava Gorloff +

Pull requests merged

A total of 14 pull requests were merged for this release.

  • #27333: MAINT: prepare 2.1.x for further development
  • #27400: BUG: apply critical sections around populating the dispatch cache
  • #27406: BUG: Stub out get_build_msvc_version if distutils.msvccompiler...
  • #27416: BUILD: fix missing include for std::ptrdiff_t for C++23 language...
  • #27433: BLD: pin setuptools to avoid breaking numpy.distutils
  • #27437: BUG: Allow unsigned shift argument for np.roll
  • #27439: BUG: Disable SVE VQSort
  • #27471: BUG: rfftn axis bug
  • #27479: BUG: Fix extra decref of PyArray_UInt8DType.
  • #27480: CI: use PyPI not scientific-python-nightly-wheels for CI doc...
  • #27481: MAINT: Check for SVE support on demand
  • #27484: BUG: initialize the promotion state to be weak
  • #27501: MAINT: Bump pypa/cibuildwheel from 2.20.0 to 2.21.2
  • #27506: BUG: avoid segfault on bad arguments in ndarray.__array_function__

Checksums

MD5

4aae28b7919b126485c1aaccee37a6ba  numpy-2.1.2-cp310-cp310-macosx_10_9_x86_64.whl
172614423a82ef73d8752ad8a59cbafc  numpy-2.1.2-cp310-cp310-macosx_11_0_arm64.whl

... (truncated)

Changelog

Sourced from numpy's changelog.

This is a walkthrough of the NumPy 2.1.0 release on Linux, modified for building with GitHub Actions and cibuildwheels and uploading to the anaconda.org staging repository for NumPy <https://anaconda.org/multibuild-wheels-staging/numpy>_. The commands can be copied into the command line, but be sure to replace 2.1.0 by the correct version. This should be read together with the :ref:general release guide <prepare_release>.

Facility preparation

Before beginning to make a release, use the requirements/*_requirements.txt files to ensure that you have the needed software. Most software can be installed with pip, but some will require apt-get, dnf, or whatever your system uses for software. You will also need a GitHub personal access token (PAT) to push the documentation. There are a few ways to streamline things:

  • Git can be set up to use a keyring to store your GitHub personal access token. Search online for the details.
  • You can use the keyring app to store the PyPI password for twine. See the online twine documentation for details.

Prior to release

Add/drop Python versions

When adding or dropping Python versions, three files need to be edited:

  • .github/workflows/wheels.yml # for github cibuildwheel
  • .travis.yml # for cibuildwheel aarch64 builds
  • setup.py # for classifier and minimum version check.

Make these changes in an ordinary PR against main and backport if necessary. Using the BLD: prefix (build label) for the commit summary will cause the wheel builds to be run so that the changes will be tested, We currently release wheels for new Python versions after the first Python rc once manylinux and cibuildwheel support it. For Python 3.11 we were able to release within a week of the rc1 announcement.

Backport pull requests

Changes that have been marked for this release must be backported to the maintenance/2.1.x branch.

Update 2.1.0 milestones

... (truncated)

Commits
  • f5afe3d Merge pull request #27507 from charris/prepare-2.1.2
  • 6b9ef48 REL: Prepare for the NumPy 2.1.2 release [wheel build]
  • 6d85a24 MAINT: Pin setuptools for Python < 3.12 [wheel build]
  • 7f327d8 Merge pull request #27506 from charris/backport-27503
  • 09e9cd9 BUG: avoid segfault on bad arguments in ndarray.array_function
  • 06b4793 Merge pull request #27501 from charris/backport-27495
  • 364efb5 MAINT: Bump pypa/cibuildwheel from 2.21.1 to 2.21.2
  • df0e261 Merge pull request #27484 from ngoldbaum/use-weak-default
  • fa61bc6 Merge pull request #27481 from charris/backport-27472
  • d6d06ae Merge pull request #27480 from charris/backport-27475
  • Additional commits viewable in compare view

Updates pymongo from 4.8.0 to 4.10.1

Release notes

Sourced from pymongo's releases.

PyMongo 4.10.1

Community notes: https://www.mongodb.com/community/forums/t/pymongo-4-10-1-released/299573

PyMongo 4.10.0

Community notes: https://www.mongodb.com/community/forums/t/pymongo-4-10-0-released/299474

PyMongo 4.9.2

  • Fixed a bug where pymongo.asynchronous.mongo_client.AsyncMongoClient could deadlock.
  • Fixed a bug where PyMongo could fail to import on Windows if asyncio is misconfigured.
  • Fixed a bug where pymongo.results.UpdateResult.did_upsert would raise a TypeError.

PyMongo 4.9.1

Community notes: https://www.mongodb.com/community/forums/t/pymongo-4-9-released/297833

Changelog

Sourced from pymongo's changelog.

Changes in Version 4.10.1 (2024/10/01)

Version 4.10.1 is a bug fix release.

  • Fixed a bug where :meth:~pymongo.results.UpdateResult.did_upsert would raise a TypeError.
  • Fixed Binary BSON subtype (9) support on big-endian operating systems (such as zSeries).

Issues Resolved ...............

See the PyMongo 4.10.1 release notes in JIRA_ for the list of resolved issues in this release.

.. _PyMongo 4.10.1 release notes in JIRA: https://jira.mongodb.org/secure/ReleaseNote.jspa?projectId=10004&version=40788

Changes in Version 4.10.0 (2024/09/30)

  • Added provisional (BETA) support for a new Binary BSON subtype (9) used for efficient storage and retrieval of vectors: densely packed arrays of numbers, all of the same type. This includes new methods :meth:~bson.binary.Binary.from_vector and :meth:~bson.binary.Binary.as_vector.
  • Added C extension use to client metadata, for example: {"driver": {"name": "PyMongo|c", "version": "4.10.0"}, ...}
  • Fixed a bug where :class:~pymongo.asynchronous.mongo_client.AsyncMongoClient could deadlock.
  • Fixed a bug where PyMongo could fail to import on Windows if asyncio is misconfigured.

Issues Resolved ...............

See the PyMongo 4.10 release notes in JIRA_ for the list of resolved issues in this release.

.. _PyMongo 4.10 release notes in JIRA: https://jira.mongodb.org/secure/ReleaseNote.jspa?projectId=10004&version=40553

Changes in Version 4.9.2 (2024/10/02)

  • Fixed a bug where :class:~pymongo.asynchronous.mongo_client.AsyncMongoClient could deadlock.
  • Fixed a bug where PyMongo could fail to import on Windows if asyncio is misconfigured.
  • Fixed a bug where :meth:~pymongo.results.UpdateResult.did_upsert would raise a TypeError.

Issues Resolved ...............

See the PyMongo 4.9.2 release notes in JIRA_ for the list of resolved issues in this release.

.. _PyMongo 4.9.2 release notes in JIRA: https://jira.mongodb.org/secure/ReleaseNote.jspa?projectId=10004&version=40732

... (truncated)

Commits
  • 77cd7ab BUMP 4.10.1
  • 1c28430 PYTHON-4808 Add changelog for 4.10.1 (#1890)
  • 7848feb PYTHON-4786 - Fix UpdateResult.did_upsert TypeError (#1878)
  • 0279407 PYTHON-4806 Fix expected metadata in mockupdb tests (#1888)
  • 7fbeca9 [PYTHON-4803] Big endian fix for binary bson vectors (#1885)
  • bfba548 PYTHON-4789 Migrate test_retryable_reads.py to async (#1877)
  • 8791aa0 PYTHON-4790 Migrate test_retryable_writes.py to async (#1876)
  • c0f7810 BUMP 4.11.0.dev0
  • 4713afa BUMP 4.10.0
  • ae6cfd6 [DRIVERS-2926] [PYTHON-4577] BSON Binary Vector Subtype Support (#1813)
  • Additional commits viewable in compare view

Updates redis from 5.0.8 to 5.2.0

Release notes

Sourced from redis's releases.

5.2.0

Changes

🚀 New Features

  • Extend AggregateRequest with scorer argument (#3409)

🧰 Maintenance

  • Pin pytest-profiling version due to the bug (#3417)

Contributors

We'd like to thank all the contributors who worked on this release!

@​uglide @​rbs333 @​vladvildanov @​dwdougherty

5.1.1

Changes

5.1.1

🐛 Bug Fixes

  • Fixed return type for Redis Set commands to be Set instead of List (#3399)
  • Fixed bug with partial Hiredis availability (#3400)
  • Fixed bug with async pipeline and cluster fails with some commands (#3402)

5.1.0

🚀 New Features

How to start with Client-side caching?

  1. Install redis-py 5.1.0
  2. Use the following code snippet:
r = Redis(protocol=3, cache_config=CacheConfig())
cache = r.get_cache()
r.set("foo", "bar")
get key from redis and save in local cache
print(r.get("foo"))
get key from local cache
print(cache.get(CacheKey(command="GET", redis_keys=("foo",))).cache_value)
change key in redis (cause invalidation)
r.set("foo", "barbar")
Retrieves a new value from server and cache it
print(r.get("foo"))
Make sure that new value was cached
</tr></table>

... (truncated)

Commits

Updates zarr from 2.18.2 to 2.18.3

Release notes

Sourced from zarr's releases.

v2.18.3

What's Changed

Full Changelog: zarr-developers/zarr-python@v2.18.2...v2.18.3

Changelog

Sourced from zarr's changelog.

2.18.3

Enhancements

* Added support for creating a copy of data when converting a `zarr.Array`
  to a numpy array.
  By :user:`David Stansby <dstansby>` (:issue:`2106`) and 
  :user:`Joe Hamman <jhamman>` (:issue:`2123`).

Maintenance

* Removed support for Python 3.9.
  By :user:`David Stansby &lt;dstansby&gt;` (:issue:`2074`).
  • Fix a regression when using orthogonal indexing with a scalar.
    By :user:Deepak Cherian &amp;lt;dcherian&amp;gt; :issue:1931

  • Added compatibility with NumPy 2.1.
    By :user:David Stansby &amp;lt;dstansby&amp;gt;

  • Bump minimum NumPy version to 1.24.
    :user:Joe Hamman &amp;lt;jhamman&amp;gt; (:issue:2127).

Deprecations
</code></pre>
<ul>
<li>Deprecate :class:<code>zarr.n5.N5Store</code> and :class:<code>zarr.n5.N5FSStore</code>. These
stores are slated to be removed in Zarr Python 3.0.
By :user:<code>Joe Hamman &lt;jhamman&gt;</code> :issue:<code>2085</code>.</li>
</ul>
<p>.. _release_2.18.2:</p>
</blockquote>
</details>
<details>
<summary>Commits</summary>

<ul>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/f1978dde52b11a7803a1a06937e69948acc8fe84&quot;&gt;&lt;code&gt;f1978dd&lt;/code&gt;&lt;/a> Bump numpy from 2.1.0 to 2.1.1 in the requirements group (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2151&quot;&gt;#2151&lt;/a&gt;)&lt;/li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/6656d1a2d8f95dfb29724327d9dcff69667dc9d7&quot;&gt;&lt;code&gt;6656d1a&lt;/code&gt;&lt;/a> Bump the actions group with 2 updates (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2146&quot;&gt;#2146&lt;/a&gt;)&lt;/li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/cb2c669526c4ba78a8b2f077de9f3cdbc356e56a&quot;&gt;&lt;code&gt;cb2c669&lt;/code&gt;&lt;/a> Remove un-needed package installs in CI (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2095&quot;&gt;#2095&lt;/a&gt;)&lt;/li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/cc2cdeeccca4a0db2adf4bcde0b7f91b2100bbec&quot;&gt;&lt;code&gt;cc2cdee&lt;/code&gt;&lt;/a> chore: bump minimum numpy version to 1.24 (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2127&quot;&gt;#2127&lt;/a&gt;)&lt;/li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/9e0b5e88d9473fb3403a9cb35eff0526a75197cb&quot;&gt;&lt;code&gt;9e0b5e8&lt;/code&gt;&lt;/a> Bump the requirements group across 1 directory with 3 updates (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2129&quot;&gt;#2129&lt;/a&gt;)&lt;/li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/5bf57bd7492159823f83937fc7ccab2fdb61eeb5&quot;&gt;&lt;code&gt;5bf57bd&lt;/code&gt;&lt;/a> Run tests on numpy 1.23 (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2124&quot;&gt;#2124&lt;/a&gt;)&lt;/li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/2e928b145c5ffdb088c9973641d71ac2937e5e49&quot;&gt;&lt;code&gt;2e928b1&lt;/code&gt;&lt;/a> Deprecate N5Store (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2103&quot;&gt;#2103&lt;/a&gt;)&lt;/li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/d1b92b5a99562848c2e27622d016fd9ce8b2adae&quot;&gt;&lt;code&gt;d1b92b5&lt;/code&gt;&lt;/a> fix: numpy 1.24 compat for Array.<strong>array</strong> (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2123&quot;&gt;#2123&lt;/a&gt;)&lt;/li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/025e1031fc43b6e672b0dc9a53953afb1b9eef5d&quot;&gt;&lt;code&gt;025e103&lt;/code&gt;&lt;/a> Bump test version of numcodecs (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2114&quot;&gt;#2114&lt;/a&gt;)&lt;/li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/35e8106278e94edd91dad370bab33f5633167044&quot;&gt;&lt;code&gt;35e8106&lt;/code&gt;&lt;/a> Fix Array.<strong>array</strong> for numpy 2.1 (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2106&quot;&gt;#2106&lt;/a&gt;)&lt;/li>
<li>Additional commits viewable in <a href="https://github.com/zarr-developers/zarr-python/compare/v2.18.2...v2.18.3&quot;&gt;compare view</a></li>
</ul>
</details>

<br />

Updates coverage from 7.6.0 to 7.6.4

Changelog

Sourced from coverage's changelog.

Version 7.6.4 — 2024-10-20

  • fix: multi-line with statements could cause contained branches to be incorrectly marked as missing (issue 1880_). This is now fixed.

.. _issue 1880: nedbat/coveragepy#1880

.. _changes_7-6-3:

Version 7.6.3 — 2024-10-13

  • Fix: nested context managers could incorrectly be analyzed to flag a missing branch on the last context manager, as described in issue 1876_. This is now fixed.

  • Fix: the missing branch message about not exiting a module had an extra "didn't," as described in issue 1873_. This is now fixed.

.. _issue 1873: nedbat/coveragepy#1873 .. _issue 1876: nedbat/coveragepy#1876

.. _changes_7-6-2:

Version 7.6.2 — 2024-10-09

  • Dropped support for Python 3.8 and PyPy 3.8.

  • Fix: a final wildcard match/case clause assigning to a name (case _ as value) was incorrectly marked as a missing branch. This is now fixed, closing issue 1860_.

  • Fewer things are considered branches now. Lambdas, comprehensions, and generator expressions are no longer marked as missing branches if they don't complete execution. Closes issue 1852_.

  • Fix: the HTML report didn't properly show multi-line f-strings that end with a backslash continuation. This is now fixed, closing issue 1836, thanks to LiuYinCarl and Marco Ricci <pull 1838_>.

  • Fix: the LCOV report now has correct line numbers (fixing issue 1846) and better branch descriptions for BRDA records (fixing issue 1850). There are other changes to lcov also, including a new configuration option :ref:line_checksums <config_lcov_line_checksums> to control whether line checksums are included in the lcov report. The default is false. To keep checksums set it to true. All this work is thanks to Zack Weinberg

... (truncated)

Commits
  • f24f76b docs: sample HTML for 7.6.4
  • 96e10f7 docs: prep for 7.6.4
  • b8c236a fix: multi-line with-statements exit correctly. #1880
  • 64b7a45 docs: another discord reference
  • 68d7427 docs: Python Discord
  • 43adcea build: include 3.14 in the usual Pythons
  • fb2b49f build: github_releases can update older releases, and pauses to get the sorti...
  • ca550ca 3.0b2 wasn't correctly titled
  • debcc77 build: bump version
  • 342a4cb docs: sample HTML for 7.6.3
  • Additional commits viewable in compare view

Updates pytest from 8.3.2 to 8.3.3

Release notes

Sourced from pytest's releases.

8.3.3

pytest 8.3.3 (2024-09-09)

Bug fixes

  • #12446: Avoid calling @property (and other instance descriptors) during fixture discovery -- by asottile{.interpreted-text role="user"}

  • #12659: Fixed the issue of not displaying assertion failure differences when using the parameter --import-mode=importlib in pytest>=8.1.

  • #12667: Fixed a regression where type change in [ExceptionInfo.errisinstance]{.title-ref} caused [mypy]{.title-ref} to fail.

  • #12744: Fixed typing compatibility with Python 3.9 or less -- replaced [typing.Self]{.title-ref} with [typing_extensions.Self]{.title-ref} -- by Avasam{.interpreted-text role="user"}

  • #12745: Fixed an issue with backslashes being incorrectly converted in nodeid paths on Windows, ensuring consistent path handling across environments.

  • #6682: Fixed bug where the verbosity levels where not being respected when printing the "msg" part of failed assertion (as in assert condition, msg).

  • #9422: Fix bug where disabling the terminal plugin via -p no:terminal would cause crashes related to missing the verbose option.

    -- by GTowers1{.interpreted-text role="user"}

Improved documentation

  • #12663: Clarify that the [pytest_deselected]{.title-ref} hook should be called from [pytest_collection_modifyitems]{.title-ref} hook implementations when items are deselected.
  • #12678: Remove erroneous quotes from [tmp_path_retention_policy]{.title-ref} example in docs.

Miscellaneous internal changes

  • #12769: Fix typos discovered by codespell and add codespell to pre-commit hooks.
Commits

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Bumps the pip-version group with 6 updates in the / directory:

| Package | From | To |
| --- | --- | --- |
| [numpy](https://github.com/numpy/numpy) | `2.0.1` | `2.1.2` |
| [pymongo](https://github.com/mongodb/mongo-python-driver) | `4.8.0` | `4.10.1` |
| [redis](https://github.com/redis/redis-py) | `5.0.8` | `5.2.0` |
| [zarr](https://github.com/zarr-developers/zarr-python) | `2.18.2` | `2.18.3` |
| [coverage](https://github.com/nedbat/coveragepy) | `7.6.0` | `7.6.4` |
| [pytest](https://github.com/pytest-dev/pytest) | `8.3.2` | `8.3.3` |



Updates `numpy` from 2.0.1 to 2.1.2
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v2.0.1...v2.1.2)

Updates `pymongo` from 4.8.0 to 4.10.1
- [Release notes](https://github.com/mongodb/mongo-python-driver/releases)
- [Changelog](https://github.com/mongodb/mongo-python-driver/blob/master/doc/changelog.rst)
- [Commits](mongodb/mongo-python-driver@4.8.0...4.10.1)

Updates `redis` from 5.0.8 to 5.2.0
- [Release notes](https://github.com/redis/redis-py/releases)
- [Changelog](https://github.com/redis/redis-py/blob/master/CHANGES)
- [Commits](redis/redis-py@v5.0.8...v5.2.0)

Updates `zarr` from 2.18.2 to 2.18.3
- [Release notes](https://github.com/zarr-developers/zarr-python/releases)
- [Changelog](https://github.com/zarr-developers/zarr-python/blob/main/docs/release.rst)
- [Commits](zarr-developers/zarr-python@v2.18.2...v2.18.3)

Updates `coverage` from 7.6.0 to 7.6.4
- [Release notes](https://github.com/nedbat/coveragepy/releases)
- [Changelog](https://github.com/nedbat/coveragepy/blob/master/CHANGES.rst)
- [Commits](nedbat/coveragepy@7.6.0...7.6.4)

Updates `pytest` from 8.3.2 to 8.3.3
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest@8.3.2...8.3.3)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: pip-version
- dependency-name: pymongo
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: pip-version
- dependency-name: redis
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: pip-version
- dependency-name: zarr
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: pip-version
- dependency-name: coverage
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: pip-version
- dependency-name: pytest
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: pip-version
...

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@dependabot dependabot bot requested a review from a team as a code owner November 1, 2024 11:47
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Nov 1, 2024
@dependabot dependabot bot requested a review from joaander November 1, 2024 11:47
@joaander joaander closed this Dec 11, 2024
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dependabot bot commented on behalf of github Dec 11, 2024

This pull request was built based on a group rule. Closing it will not ignore any of these versions in future pull requests.

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@joaander joaander deleted the dependabot-pip-main-pip-version-cb247a2ac0 branch December 11, 2024 14:05
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