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update exports files in preparation for new release
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@edwardsnj
edwardsnj committed Apr 30, 2024
1 parent a5e0c2e commit f7e0c33
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Showing 53 changed files with 872,614 additions and 57,291 deletions.
5,808 changes: 5,808 additions & 0 deletions smw/glycandata/export/allglycan.tsv
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14,543 changes: 14,543 additions & 0 deletions smw/glycandata/export/allmotifaligns.tsv
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9 changes: 9 additions & 0 deletions smw/glycandata/export/bcsdb.tsv
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Original file line number Diff line number Diff line change
Expand Up @@ -104,6 +104,14 @@ G15541SE 20341
G15541SE 3744
G15541SE 6501
G15541SE 8942
G16235VG 112947
G16235VG 116463
G16235VG 121712
G16235VG 128684
G16235VG 21669
G16235VG 25252
G16235VG 26901
G16235VG 4702
G16302TV 113445
G16561MI 114174
G16926ZT 134063
Expand Down Expand Up @@ -454,6 +462,7 @@ G84899DL 115937
G85016IG 144841
G85016IG 2568
G86299UP 20301
G86482BL 26642
G86633LD 26475
G86633LD 5634
G86723LO 130169
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17 changes: 17 additions & 0 deletions smw/glycandata/export/byonic_glygen_human_nlinked.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -11,6 +11,7 @@ HexNAc(2)Hex(7) % 1540.528510, G31852PQ
HexNAc(3)Hex(4)NeuGc(1) % 1564.539743, G05243OF
HexNAc(4)Hex(3)dHex(1)Pent(1) % 1576.576129, G81920JR
HexNAc(5)Hex(3)Sulpho(1) % 1581.512148, G63273GB
HexNAc(4)Hex(3)NeuGc(1) % 1605.566292, G58194AN
HexNAc(4)Hex(5) % 1622.581608, G10486CT
HexNAc(3)Hex(6)Phospho(1) % 1661.521390, G15205QB
HexNAc(1)Hex(9) % 1661.554784, G45703RF
Expand All @@ -30,6 +31,7 @@ HexNAc(4)Hex(3)dHex(1)NeuAc(1) % 1735.629286, G36923NX
HexNAc(5)Hex(4)Sulpho(1) % 1743.564972, G39411LN
HexNAc(4)Hex(4)NeuGc(1) % 1767.619116, G92821TF
HexNAc(6)Hex(3)Sulpho(1) % 1784.591521, G89430VM
HexNAc(5)Hex(3)NeuAc(1) % 1792.650750, G29898ES
HexNAc(1)Hex(10) % 1823.607608, G04681UD
HexNAc(4)Hex(5)dHex(1)Sulpho(1) % 1848.596331, G63236GA
HexNAc(6)Hex(3)Sulpho(2) % 1864.548335, G42817NX
Expand Down Expand Up @@ -92,12 +94,14 @@ HexNAc(4)Hex(5)dHex(4) % 2206.813243, G05933EN
HexNAc(7)Hex(4)dHex(1) % 2215.824811, G06853GH
HexNAc(4)Hex(5)NeuAc(1)NeuGc(1) % 2220.767356, G18999ZC
HexNAc(4)Hex(5)dHex(2)NeuGc(1) % 2221.787757, G30123TP
HexNAc(7)Hex(5) % 2231.819726, G26330YA
HexNAc(4)Hex(5)NeuGc(2) % 2236.762270, G24748EV
HexNAc(4)Hex(7)NeuAc(1) % 2237.782672, G31986NC
HexNAc(5)Hex(4)NeuAc(2) % 2245.798990, G37412TK
HexNAc(8)Hex(3)dHex(1) % 2256.851360, G46982GD
HexNAc(5)Hex(4)NeuAc(1)NeuGc(1) % 2261.793905, G29276EO
HexNAc(5)Hex(5)dHex(1)NeuAc(1) % 2262.814306, G12580WI
HexNAc(8)Hex(4) % 2272.846275, G59334JE
HexNAc(5)Hex(4)NeuGc(2) % 2277.788820, G30862UC
HexNAc(5)Hex(6)NeuAc(1) % 2278.809221, G40926MX
HexNAc(5)Hex(6)dHex(2) % 2279.829622, G66933CM
Expand Down Expand Up @@ -152,6 +156,8 @@ HexNAc(4)Hex(5)dHex(2)NeuAc(2) % 2496.888259, G84291SQ
HexNAc(6)Hex(7)dHex(1) % 2498.903909, G49739MP
HexNAc(2)Hex(13) % 2512.845451, G12959FT
HexNAc(4)Hex(6)dHex(3)NeuAc(1) % 2513.903575, G61466PB
HexNAc(7)Hex(5)dHex(2) % 2523.935543, G60027ZP
HexNAc(4)Hex(7)NeuAc(2) % 2528.878088, G30248BL
HexNAc(7)Hex(6)dHex(1) % 2539.930458, G89009DQ
HexNAc(4)Hex(5)NeuGc(3) % 2543.852602, G07937JG
HexNAc(5)Hex(5)dHex(1)NeuAc(2) % 2553.909723, G36670VW
Expand All @@ -163,6 +169,7 @@ HexNAc(5)Hex(6)dHex(4) % 2571.945440, G26271XI
HexNAc(8)Hex(5)dHex(1) % 2580.957007, G30630UO
HexNAc(5)Hex(6)dHex(1)NeuAc(1)Sulpho(2) % 2584.780759, G66876TK
HexNAc(5)Hex(6)NeuAc(1)NeuGc(1) % 2585.899552, G09643UC
HexNAc(8)Hex(6) % 2596.951922, G63976XX
HexNAc(5)Hex(6)NeuGc(2) % 2601.894467, G76792KM
HexNAc(6)Hex(5)NeuAc(2) % 2610.931186, G09406IK
HexNAc(6)Hex(5)dHex(2)NeuAc(1) % 2611.951588, G64916EE
Expand Down Expand Up @@ -234,6 +241,7 @@ HexNAc(6)Hex(8)dHex(1)NeuAc(1) % 2952.052149, G05664AS
HexNAc(7)Hex(5)dHex(1)NeuAc(2) % 2960.068468, G65225MN
HexNAc(4)Hex(7)dHex(1)NeuAc(3) % 2966.031414, G13492FY
HexNAc(6)Hex(7)NeuGc(2) % 2967.026663, G95732YS
HexNAc(6)Hex(10)dHex(1) % 2985.062380, G59400CS
HexNAc(7)Hex(7)dHex(1)NeuAc(1) % 2993.078698, G18760WR
HexNAc(6)Hex(6)dHex(1)NeuAc(2)Sulpho(1) % 2998.998733, G92113CH
HexNAc(6)Hex(11) % 3001.057294, G11719TC
Expand All @@ -248,6 +256,7 @@ HexNAc(5)Hex(6)dHex(1)NeuAc(1)NeuGc(2) % 3039.047792, G10033OC
HexNAc(6)Hex(5)dHex(1)NeuAc(3) % 3048.084512, G21976AG
HexNAc(5)Hex(6)dHex(1)NeuGc(3) % 3055.042707, G92471WM
HexNAc(6)Hex(5)dHex(1)NeuAc(2)NeuGc(1) % 3064.079427, G18950SY
HexNAc(6)Hex(6)NeuAc(3) % 3064.079427, G30740WO
HexNAc(6)Hex(6)dHex(2)NeuAc(2) % 3065.099828, G98544EX
HexNAc(8)Hex(8)dHex(1) % 3067.115478, G24481HY
HexNAc(6)Hex(7)dHex(1)NeuAc(2) % 3081.094742, G32926LW
Expand All @@ -269,6 +278,7 @@ HexNAc(6)Hex(6)dHex(1)NeuAc(3) % 3210.137335, G90885MZ
HexNAc(6)Hex(6)dHex(3)NeuAc(2) % 3211.157737, G59007LK
HexNAc(8)Hex(8)NeuAc(1) % 3212.152985, G67350BD
HexNAc(8)Hex(8)dHex(2) % 3213.173387, G15881BW
HexNAc(5)Hex(6)NeuGc(4) % 3216.075129, G92350NX
HexNAc(6)Hex(6)dHex(1)NeuAc(2)NeuGc(1) % 3226.132250, G03343NG
HexNAc(6)Hex(7)NeuAc(3) % 3226.132250, G99679NM
HexNAc(6)Hex(7)dHex(2)NeuAc(2) % 3227.152651, G17899TT
Expand All @@ -279,6 +289,7 @@ HexNAc(6)Hex(7)dHex(1)NeuAc(2)Sulpho(2) % 3241.008371, G98601GY
HexNAc(6)Hex(7)NeuAc(2)NeuGc(1) % 3242.127165, G26506TX
HexNAc(6)Hex(6)dHex(1)NeuGc(3) % 3258.122079, G61525OO
HexNAc(9)Hex(8)dHex(1) % 3270.194850, G90444EI
HexNAc(6)Hex(7)NeuGc(3) % 3274.116994, G56689CA
HexNAc(6)Hex(10)dHex(1)NeuAc(1) % 3276.157796, G51572MS
HexNAc(7)Hex(7)dHex(1)NeuAc(2) % 3284.174115, G83141DC
HexNAc(7)Hex(7)dHex(5) % 3286.214917, G87183DD
Expand Down Expand Up @@ -309,8 +320,10 @@ HexNAc(6)Hex(7)dHex(2)NeuAc(3) % 3518.248068, G87056QU
HexNAc(8)Hex(9)dHex(1)NeuAc(1) % 3520.263718, G76733PY
HexNAc(6)Hex(7)NeuAc(3)NeuGc(1) % 3533.222581, G41925PC
HexNAc(6)Hex(7)NeuAc(2)NeuGc(2) % 3549.217496, G42555WL
HexNAc(6)Hex(7)NeuAc(1)NeuGc(3) % 3565.212411, G14943SF
HexNAc(7)Hex(7)dHex(1)NeuAc(3) % 3575.269532, G25216KM
HexNAc(9)Hex(9)dHex(2) % 3578.305583, G33792IQ
HexNAc(6)Hex(7)NeuGc(4) % 3581.207325, G72778UY
HexNAc(7)Hex(7)dHex(1)NeuAc(2)NeuGc(1) % 3591.264446, G92643JL
HexNAc(9)Hex(10)dHex(1) % 3594.300497, G13716SG
HexNAc(8)Hex(7)dHex(1)NeuAc(2)Sulpho(2) % 3647.167117, G16455YH
Expand All @@ -320,6 +333,7 @@ HexNAc(6)Hex(7)dHex(1)NeuAc(3)NeuGc(1) % 3679.280490, G48433AY
HexNAc(7)Hex(6)dHex(1)NeuAc(4) % 3704.312125, G14926RK
HexNAc(6)Hex(7)dHex(1)NeuGc(4) % 3727.265234, G44606CY
HexNAc(7)Hex(8)dHex(1)NeuAc(3) % 3737.322355, G59639BE
HexNAc(7)Hex(8)dHex(3)NeuAc(2) % 3738.342756, G99618ZW
HexNAc(7)Hex(8)dHex(1)NeuAc(2)NeuGc(1) % 3753.317270, G32611PG
HexNAc(10)Hex(10)dHex(1) % 3797.379870, G12872WY
HexNAc(6)Hex(7)NeuAc(5) % 3808.323083, G11942GC
Expand All @@ -343,10 +357,13 @@ HexNAc(9)Hex(7)dHex(1)NeuAc(4) % 4272.523693, G65057SM
HexNAc(11)Hex(11)NeuAc(1) % 4307.549574, G05528SJ
HexNAc(11)Hex(11)dHex(2) % 4308.569975, G98129ME
HexNAc(7)Hex(8)dHex(3)NeuAc(4) % 4320.533589, G39820SQ
HexNAc(11)Hex(12)dHex(1) % 4324.564890, G81904DM
HexNAc(8)Hex(9)dHex(1)NeuAc(4) % 4393.549968, G51637RO
HexNAc(10)Hex(7)dHex(1)NeuAc(4) % 4475.603066, G73991OZ
HexNAc(12)Hex(12)dHex(1) % 4527.644262, G56001JD
HexNAc(9)Hex(10)dHex(1)NeuAc(4) % 4758.682164, G08898WI
HexNAc(13)Hex(14)dHex(1) % 5054.829282, G09086VB
HexNAc(16)Hex(12)dHex(1) % 5339.961753, G44023UC
HexNAc(14)Hex(15)dHex(6)NeuAc(1) % 6441.346439, G78330KT
HexNAc(14)Hex(15)dHex(5)NeuAc(2) % 6586.383947, G85428IQ
HexNAc(14)Hex(15)dHex(6)NeuAc(2) % 6732.441855, G72134PC
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