GlyGen-GlycanData-Export-v1.5.0
·
704 commits
to master
since this release
- Fix bug in fully_defined definition, broaden definition to tolerate missing reducing end anomer and/or ring
- Export subsumption relationships, including Ancestor and Descendant
- New image dump, including SVG and PNG files, CFG and SNFG formats. (concatenate chunks for tar/bzip2)
- Change in the file format for images.tsv to indicate file size, format, and type.
- Fix bug in annotation of PubChem associations, update to latest associations from PubChem
- Update evidence statement for species annotations for Xyl containing glycans
- Substantial increase in GlyTouCan registered MS-style composition glycan descriptions, with accompanying semantic names in names export file.
- Special-purpose scripts to dump the RDF triples directly from the file-system cache and export specific tables where the SPARQL queries took too long to run.
- RDF triples of GlycanData release provided as export file.
- Tweak UniCarbKB SPARQL queries to get better coverage of annotated UniCarbKB glycans