1. interoperability-embedded-python

This proof of concept aims to show how the iris interoperability framework can be use with embedded python.

1.1. Table of Contents

1. interoperability-embedded-python
2. Demo
3. Prerequisites
4. Installation
5. How to Run the Sample
6. What's inside the repository
7. How it works
8. Credits

1.2. Example

from iop import BusinessOperation,Message

class MyBusinessOperation(BusinessOperation):
    
    def on_init(self):
        #This method is called when the component is becoming active in the production

        self.log_info("[Python] ...MyBusinessOperation:on_init() is called")

        return

    def on_teardown(self):
        #This method is called when the component is becoming inactive in the production

        self.log_info("[Python] ...MyBusinessOperation:on_teardown() is called")

        return

    def on_message(self, message_input:MyRequest):
        # called from service/process/operation, message is of type MyRequest with property request_string

        self.log_info("[Python] ...MyBusinessOperation:on_message() is called with message:"+message_input.request_string)

        response = MyResponse("...MyBusinessOperation:on_message() echos")

        return response

@dataclass
class MyRequest(Message):

    request_string:str = None

@dataclass
class MyResponse(Message):

    my_string:str = None

1.3. Register a component

Thanks to the method iop.Utils.register_component() :

Start an embedded python shell :

/usr/irissys/bin/irispython

Then use this class method to add a python class to the component list for interoperability.

from iop import Utils

Utils.register_component(<ModuleName>,<ClassName>,<PathToPyFile>,<OverWrite>,<NameOfTheComponent>)

e.g :

from iop import Utils

Utils.register_component("MyCombinedBusinessOperation","MyCombinedBusinessOperation","/irisdev/app/src/python/demo/",1,"PEX.MyCombinedBusinessOperation")

This is a hack, this not for production.

2. Demo

The demo can be found inside src/python/demo/reddit/ and is composed of :

An adapter.py file that holds a RedditInboundAdapter that will, given a service, fetch Reddit recent posts.

A bs.py file that holds three services that does the same thing, they will call our Process and send it reddit post. One work on his own, one use the RedditInBoundAdapter we talked about earlier and the last one use a reddit inbound adapter coded in ObjectScript.

A bp.py file that holds a FilterPostRoutingRule process that will analyze our reddit posts and send it to our operations if it contains certain words.

A bo.py file that holds :
- Two email operations that will send a mail to a certain company depending on the words analyzed before, one works on his own and the other one works with an OutBoundAdapter.
- Two file operations that will write in a text file depending on the words analyzed before, one works on his own and the other one works with an OutBoundAdapter.

New json trace for python native messages :

3. Prerequisites

Make sure you have git and Docker desktop installed.

4. Installation

4.1. With Docker

Clone/git pull the repo into any local directory

git clone https://github.com/grongierisc/interpeorability-embedded-python

Open the terminal in this directory and run:

docker-compose build

Run the IRIS container with your project:

docker-compose up -d

4.2. Without Docker

Install the grongier_pex-1.2.4-py3-none-any.whl on you local iris instance :

/usr/irissys/bin/irispython -m pip install grongier_pex-1.2.4-py3-none-any.whl

Then load the ObjectScript classes :

do $System.OBJ.LoadDir("/opt/irisapp/src","cubk","*.cls",1)

4.3. With ZPM

zpm "install pex-embbeded-python"

5. How to Run the Sample

5.1. Docker containers

In order to have access to the InterSystems images, we need to go to the following url: http://container.intersystems.com. After connecting with our InterSystems credentials, we will get our password to connect to the registry. In the docker VScode addon, in the image tab, by pressing connect registry and entering the same url as before (http://container.intersystems.com) as a generic registry, we will be asked to give our credentials. The login is the usual one but the password is the one we got from the website.

From there, we should be able to build and compose our containers (with the docker-compose.yml and Dockerfile files given).

5.2. Management Portal and VSCode

This repository is ready for VS Code.

Open the locally-cloned interoperability-embedeed-python folder in VS Code.

If prompted (bottom right corner), install the recommended extensions.

IMPORTANT: When prompted, reopen the folder inside the container so you will be able to use the python components within it. The first time you do this it may take several minutes while the container is readied.

By opening the folder remote you enable VS Code and any terminals you open within it to use the python components within the container. Configure these to use /usr/irissys/bin/irispython

5.3. Open the production

To open the production you can go to production.
You can also click on the bottom on the 127.0.0.1:52773[IRISAPP] button and select Open Management Portal then, click on [Interoperability] and [Configure] menus then click [productions] and [Go].

The production already has some code sample.

Here we can see the production and our pure python services and operations:

New json trace for python native messages :

6. What's inside the repository

6.1. Dockerfile

A dockerfile which install some python dependancies (pip, venv) and sudo in the container for conviencies. Then it create the dev directory and copy in it this git repository.

It starts IRIS and activates %Service_CallIn for Python Shell. Use the related docker-compose.yml to easily setup additional parametes like port number and where you map keys and host folders.

This dockerfile ends with the installation of requirements for python modules.

Use .env/ file to adjust the dockerfile being used in docker-compose.

6.2. .vscode/settings.json

Settings file to let you immedietly code in VSCode with VSCode ObjectScript plugin

6.3. .vscode/launch.json

Config file if you want to debug with VSCode ObjectScript

Read about all the files in this article

6.4. .vscode/extensions.json

Recommendation file to add extensions if you want to run with VSCode in the container.

More information here

This is very useful to work with embedded python.

6.5. src folder

src
├── Grongier
│   └── PEX // ObjectScript classes that wrap python code
│       ├── BusinessOperation.cls
│       ├── BusinessProcess.cls
│       ├── BusinessService.cls
│       ├── Common.cls
│       ├── Director.cls
│       ├── InboundAdapter.cls
│       ├── Message.cls
│       ├── OutboundAdapter.cls
│       ├── Python.cls
│       ├── Test.cls
│       └── _utils.cls
├── PEX // Some example of wrapped classes
│   └── Production.cls
└── python
    ├── demo // Actual python code to run this demo
    |   `-- reddit
    |       |-- adapter.py
    |       |-- bo.py
    |       |-- bp.py
    |       |-- bs.py
    |       |-- message.py
    |       `-- obj.py
    ├── dist // Wheel used to implement python interoperability components
    │   └── grongier_pex-1.2.4-py3-none-any.whl
    ├── grongier
    │   └── pex // Helper classes to implement interoperability components
    │       ├── _business_host.py
    │       ├── _business_operation.py
    │       ├── _business_process.py
    │       ├── _business_service.py
    │       ├── _common.py
    │       ├── _director.py
    │       ├── _inbound_adapter.py
    │       ├── _message.py
    │       ├── _outbound_adapter.py
    │       ├── __init__.py
    │       └── _utils.py
    └── setup.py // setup to build the wheel

7. How it works

7.1. The `init.py`file

This file will allow us to create the classes to import in the code.
It gets from the multiple files seen earlier the classes and make them into callable classes. That way, when you wish to create a business operation, for example, you can just do:

from iop import BusinessOperation

7.2. The `common` class

The common class shouldn't be called by the user, it defines almost all the other classes.
This class defines:

on_init: The on_init() method is called when the component is started.
Use the on_init() method to initialize any structures needed by the component.

on_tear_down: Called before the component is terminated.
Use it to free any structures.

on_connected: The on_connected() method is called when the component is connected or reconnected after being disconnected.
Use the on_connected() method to initialize any structures needed by the component.

log_info: Write a log entry of type "info". :log entries can be viewed in the management portal.

log_alert: Write a log entry of type "alert". :log entries can be viewed in the management portal.

log_warning: Write a log entry of type "warning". :log entries can be viewed in the management portal.

log_error: Write a log entry of type "error". :log entries can be viewed in the management portal.

7.3. The `business_host` class

The business host class shouldn't be called by the user, it is the base class for all the business classes.
This class defines:

send_request_sync: Send the specified message to the target business process or business operation synchronously.
Parameters:

target: a string that specifies the name of the business process or operation to receive the request.
The target is the name of the component as specified in the Item Name property in the production definition, not the class name of the component.
request: specifies the message to send to the target. The request is either an instance of a class that is a subclass of Message class or of IRISObject class.
If the target is a build-in ObjectScript component, you should use the IRISObject class. The IRISObject class enables the PEX framework to convert the message to a class supported by the target.
timeout: an optional integer that specifies the number of seconds to wait before treating the send request as a failure. The default value is -1, which means wait forever.
description: an optional string parameter that sets a description property in the message header. The default is None.

Returns: the response object from target.

Raises: TypeError: if request is not of type Message or IRISObject.

send_request_async: Send the specified message to the target business process or business operation asynchronously. Parameters:

target: a string that specifies the name of the business process or operation to receive the request.
The target is the name of the component as specified in the Item Name property in the production definition, not the class name of the component.
request: specifies the message to send to the target. The request is an instance of IRISObject or of a subclass of Message.
If the target is a built-in ObjectScript component, you should use the IRISObject class. The IRISObject class enables the PEX framework to convert the message to a class supported by the target.
description: an optional string parameter that sets a description property in the message header. The default is None.

Raises: TypeError: if request is not of type Message or IRISObject.

get_adapter_type: Name of the registred Adapter.

7.4. The `inbound_adapter` class

Inbound Adapter in Python are subclass from iop.InboundAdapter in Python, that inherit from all the functions of the common class.
This class is responsible for receiving the data from the external system, validating the data, and sending it to the business service by calling the BusinessHost process_input method. This class defines:

on_task: Called by the production framework at intervals determined by the business service CallInterval property.
The message can have any structure agreed upon by the inbound adapter and the business service.

Example of an inbound adapter ( situated in the src/python/demo/reddit/adapter.py file ):

from iop import InboundAdapter
import requests
import iris
import json

class RedditInboundAdapter(InboundAdapter):
    """
    This adapter use requests to fetch self.limit posts as data from the reddit
    API before calling process_input for each post.
    """
    def on_init(self):
        
        if not hasattr(self,'feed'):
            self.feed = "/new/"
        
        if self.limit is None:
            raise TypeError('no Limit field')
        
        self.last_post_name = ""
        
        return 1

    def on_task(self):
        self.log_info(f"LIMIT:{self.limit}")
        if self.feed == "" :
            return 1
        
        tSC = 1
        # HTTP Request
        try:
            server = "https://www.reddit.com"
            request_string = self.feed+".json?before="+self.last_post_name+"&limit="+self.limit
            self.log_info(server+request_string)
            response = requests.get(server+request_string)
            response.raise_for_status()

            data = response.json()
            updateLast = 0

            for key, value in enumerate(data['data']['children']):
                if value['data']['selftext']=="":
                    continue
                post = iris.cls('dc.Reddit.Post')._New()
                post._JSONImport(json.dumps(value['data']))
                post.OriginalJSON = json.dumps(value)
                if not updateLast:
                    self.LastPostName = value['data']['name']
                    updateLast = 1
                response = self.BusinessHost.ProcessInput(post)
        except requests.exceptions.HTTPError as err:
            if err.response.status_code == 429:
                self.log_warning(err.__str__())
            else:
                raise err
        except Exception as err: 
            self.log_error(err.__str__())
            raise err

        return tSC

7.5. The `outbound_adapter` class

Outbound Adapter in Python are subclass from iop.OutboundAdapter in Python, that inherit from all the functions of the common class.
This class is responsible for sending the data to the external system.

The Outbound Adapter gives the Operation the possibility to have a heartbeat notion. To activate this option, the CallInterval parameter of the adapter must be strictly greater than 0.

Example of an outbound adapter ( situated in the src/python/demo/reddit/adapter.py file ):

class TestHeartBeat(OutboundAdapter):

    def on_keepalive(self):
        self.log_info('beep')

    def on_task(self):
        self.log_info('on_task')

7.6. The `business_service` class

This class is responsible for receiving the data from external system and sending it to business processes or business operations in the production.
The business service can use an adapter to access the external system, which is specified overriding the get_adapter_type method.
There are three ways of implementing a business service:

Polling business service with an adapter - The production framework at regular intervals calls the adapter’s OnTask() method, which sends the incoming data to the the business service ProcessInput() method, which, in turn calls the OnProcessInput method with your code.
Polling business service that uses the default adapter - In this case, the framework calls the default adapter's OnTask method with no data. The OnProcessInput() method then performs the role of the adapter and is responsible for accessing the external system and receiving the data.
Nonpolling business service - The production framework does not initiate the business service. Instead custom code in either a long-running process or one that is started at regular intervals initiates the business service by calling the Director.CreateBusinessService() method.

Business service in Python are subclass from iop.BusinessService in Python, that inherit from all the functions of the business host.
This class defines:

on_process_input: Receives the message from the inbond adapter via the PRocessInput method and is responsible for forwarding it to target business processes or operations.
If the business service does not specify an adapter, then the default adapter calls this method with no message and the business service is responsible for receiving the data from the external system and validating it. Parameters:

message_input: an instance of IRISObject or subclass of Message containing the data that the inbound adapter passes in.
The message can have any structure agreed upon by the inbound adapter and the business service.

Example of a business service ( situated in the src/python/demo/reddit/bs.py file ):

from iop import BusinessService

import iris

from message import PostMessage
from obj import PostClass

class RedditServiceWithPexAdapter(BusinessService):
    """
    This service use our python Python.RedditInboundAdapter to receive post
    from reddit and call the FilterPostRoutingRule process.
    """
    def get_adapter_type():
        """
        Name of the registred Adapter
        """
        return "Python.RedditInboundAdapter"

    def on_process_input(self, message_input):
        msg = iris.cls("dc.Demo.PostMessage")._New()
        msg.Post = message_input
        return self.send_request_sync(self.target,msg)

    def on_init(self):
        
        if not hasattr(self,'target'):
            self.target = "Python.FilterPostRoutingRule"
        
        return

7.7. The `business_process` class

Typically contains most of the logic in a production.
A business process can receive messages from a business service, another business process, or a business operation.
It can modify the message, convert it to a different format, or route it based on the message contents.
The business process can route a message to a business operation or another business process.
Business processes in Python are subclass from iop.BusinessProcess in Python, that inherit from all the functions of the business host.
This class defines:

on_request: Handles requests sent to the business process. A production calls this method whenever an initial request for a specific business process arrives on the appropriate queue and is assigned a job in which to execute.
Parameters:

request: An instance of IRISObject or subclass of Message that contains the request message sent to the business process.

Returns: An instance of IRISObject or subclass of Message that contains the response message that this business process can return to the production component that sent the initial message.

on_response: Handles responses sent to the business process in response to messages that it sent to the target.
A production calls this method whenever a response for a specific business process arrives on the appropriate queue and is assigned a job in which to execute.
Typically this is a response to an asynchronous request made by the business process where the responseRequired parameter has a true value.
Parameters:

request: An instance of IRISObject or subclass of Message that contains the initial request message sent to the business process.
response: An instance of IRISObject or subclass of Message that contains the response message that this business process can return to the production component that sent the initial message.
callRequest: An instance of IRISObject or subclass of Message that contains the request that the business process sent to its target.
callResponse: An instance of IRISObject or subclass of Message that contains the incoming response.
completionKey: A string that contains the completionKey specified in the completionKey parameter of the outgoing SendAsync() method.

Returns: An instance of IRISObject or subclass of Message that contains the response message that this business process can return to the production component that sent the initial message.

on_complete: Called after the business process has received and handled all responses to requests it has sent to targets.
Parameters:

request: An instance of IRISObject or subclass of Message that contains the initial request message sent to the business process.
response: An instance of IRISObject or subclass of Message that contains the response message that this business process can return to the production component that sent the initial message.

Returns: An instance of IRISObject or subclass of Message that contains the response message that this business process can return to the production component that sent the initial message.

Example of a business process ( situated in the src/python/demo/reddit/bp.py file ):

from iop import BusinessProcess

from message import PostMessage
from obj import PostClass

class FilterPostRoutingRule(BusinessProcess):
    """
    This process receive a PostMessage containing a reddit post.
    It then understand if the post is about a dog or a cat or nothing and
    fill the right infomation inside the PostMessage before sending it to
    the FileOperation operation.
    """
    def on_init(self):
        
        if not hasattr(self,'target'):
            self.target = "Python.FileOperation"
        
        return

    def on_request(self, request):

        if 'dog'.upper() in request.post.selftext.upper():
            request.to_email_address = 'dog@company.com'
            request.found = 'Dog'
        if 'cat'.upper() in request.post.selftext.upper():
            request.to_email_address = 'cat@company.com'
            request.found = 'Cat'

        if request.found is not None:
            return self.send_request_sync(self.target,request)
        else:
            return

7.8. The `business_operation` class

This class is responsible for sending the data to an external system or a local system such as an iris database.
The business operation can optionally use an adapter to handle the outgoing message which is specified overriding the get_adapter_type method.
If the business operation has an adapter, it uses the adapter to send the message to the external system.
The adapter can either be a PEX adapter, an ObjectScript adapter or a python adapter.
Business operation in Python are subclass from iop.BusinessOperation in Python, that inherit from all the functions of the business host.

7.8.1. The dispacth system

In a business operation it is possbile to create any number of function similar to the on_message method that will take as argument a typed request like this my_special_message_method(self,request: MySpecialMessage).

The dispatch system will automatically analyze any request arriving to the operation and dispacth the requests depending of their type. If the type of the request is not recognized or is not specified in any on_message like function, the dispatch system will send it to the on_message function.

7.8.2. The methods

This class defines:

on_message: Called when the business operation receives a message from another production component that can not be dispatched to another function.
Typically, the operation will either send the message to the external system or forward it to a business process or another business operation. If the operation has an adapter, it uses the Adapter.invoke() method to call the method on the adapter that sends the message to the external system. If the operation is forwarding the message to another production component, it uses the SendRequestAsync() or the SendRequestSync() method.
Parameters:

request: An instance of either a subclass of Message or of IRISObject containing the incoming message for the business operation.

Returns: The response object

Example of a business operation ( situated in the src/python/demo/reddit/bo.py file ):

from iop import BusinessOperation

from message import MyRequest,MyMessage

import iris

import os
import datetime
import smtplib
from email.mime.text import MIMEText

class EmailOperation(BusinessOperation):
    """
    This operation receive a PostMessage and send an email with all the
    important information to the concerned company ( dog or cat company )
    """

    def my_message(self,request:MyMessage):
        sender = 'admin@example.com'
        receivers = 'toto@example.com'
        port = 1025
        msg = MIMEText(request.toto)

        msg['Subject'] = 'MyMessage'
        msg['From'] = sender
        msg['To'] = receivers

        with smtplib.SMTP('localhost', port) as server:
            server.sendmail(sender, receivers, msg.as_string())
            print("Successfully sent email")

    def on_message(self, request):

        sender = 'admin@example.com'
        receivers = [ request.to_email_address ]


        port = 1025
        msg = MIMEText('This is test mail')

        msg['Subject'] = request.found+" found"
        msg['From'] = 'admin@example.com'
        msg['To'] = request.to_email_address

        with smtplib.SMTP('localhost', port) as server:
            
            # server.login('username', 'password')
            server.sendmail(sender, receivers, msg.as_string())
            print("Successfully sent email")

If this operation is called using a MyRequest message, the my_message function will be called thanks to the dispatcher, otherwise the on_message function will be called.

7.9. The `director` class

The Directorclass is used for nonpolling business services, that is, business services which are not automatically called by the production framework (through the inbound adapter) at the call interval.
Instead these business services are created by a custom application by calling the Director.create_business_service() method.
This class defines:

create_business_service: The create_business_service() method initiates the specified business service.
Parameters:

connection: an IRISConnection object that specifies the connection to an IRIS instance for Java.
target: a string that specifies the name of the business service in the production definition.

Returns: an object that contains an instance of IRISBusinessService

WIP example

7.10. The `objects`

We will use dataclass to hold information in our messages in a obj.py file.

Example of an object ( situated in the src/python/demo/reddit/obj.py file ):

from dataclasses import dataclass

@dataclass
class PostClass:
    title: str
    selftext : str
    author: str
    url: str
    created_utc: float = None
    original_json: str = None

7.11. The `messages`

The messages will contain one or more objects, located in the obj.py file.
Messages, requests and responses all inherit from the iop.Message class.

These messages will allow us to transfer information between any business service/process/operation.

Example of a message ( situated in the src/python/demo/reddit/message.py file ):

from iop import Message

from dataclasses import dataclass

from obj import PostClass

@dataclass
class PostMessage(Message):
    post:PostClass = None
    to_email_address:str = None
    found:str = None

WIP It is to be noted that it is needed to use types when you define an object or a message.

7.12. How to regsiter a component

You can register a component to iris in many way :

Only one component with register_component
All the component in a file with register_file
All the component in a folder with register_folder

7.12.1. register_component

Start an embedded python shell :

/usr/irissys/bin/irispython

Then use this class method to add a new py file to the component list for interoperability.

from iop import Utils
Utils.register_component(<ModuleName>,<ClassName>,<PathToPyFile>,<OverWrite>,<NameOfTheComponent>)

e.g :

from iop import Utils
Utils.register_component("MyCombinedBusinessOperation","MyCombinedBusinessOperation","/irisdev/app/src/python/demo/",1,"PEX.MyCombinedBusinessOperation")

7.12.2. register_file

Start an embedded python shell :

/usr/irissys/bin/irispython

Then use this class method to add a new py file to the component list for interoperability.

from iop import Utils
Utils.register_file(<File>,<OverWrite>,<PackageName>)

e.g :

from iop import Utils
Utils.register_file("/irisdev/app/src/python/demo/bo.py",1,"PEX")

7.12.3. register_folder

Start an embedded python shell :

/usr/irissys/bin/irispython

Then use this class method to add a new py file to the component list for interoperability.

from iop import Utils
Utils.register_folder(<Path>,<OverWrite>,<PackageName>)

e.g :

from iop import Utils
Utils.register_folder("/irisdev/app/src/python/demo/",1,"PEX")

7.13. Direct use of Grongier.PEX

If you don't want to use the register_component util. You can add a Grongier.PEX.BusinessService component directly into the management portal and configure the properties :

%module :
- Module name of your python code
%classname :
- Classname of you component
%classpaths
- Path where you component is.
  - This can one or more Classpaths (separated by '|' character) needed in addition to PYTHON_PATH

e.g :

8. Credits

Most of the code came from PEX for Python by Mo Cheng and Summer Gerry.

Works only on IRIS 2021.2 +

Name		Name	Last commit message	Last commit date
Latest commit History 48 Commits
.devcontainer		.devcontainer
.github/workflows		.github/workflows
.vscode		.vscode
init.db		init.db
output		output
src/python		src/python
.dockerignore		.dockerignore
.gitattributes		.gitattributes
.gitignore		.gitignore
Dockerfile		Dockerfile
IRISAPP.session.sql		IRISAPP.session.sql
LICENSE		LICENSE
README.md		README.md
dev.md		dev.md
docker-compose.yml		docker-compose.yml
merge.cpf		merge.cpf
module.xml		module.xml
requirements.txt		requirements.txt

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grongierisc/iris-python-interoperability-template

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1. interoperability-embedded-python

1.1. Table of Contents

1.2. Example

1.3. Register a component

2. Demo

3. Prerequisites

4. Installation

4.1. With Docker

4.2. Without Docker

4.3. With ZPM

5. How to Run the Sample

5.1. Docker containers

5.2. Management Portal and VSCode

5.3. Open the production

6. What's inside the repository

6.1. Dockerfile

6.2. .vscode/settings.json

6.3. .vscode/launch.json

6.4. .vscode/extensions.json

6.5. src folder

7. How it works

7.1. The __init__.pyfile

7.2. The common class

7.3. The business_host class

7.4. The inbound_adapter class

7.5. The outbound_adapter class

7.6. The business_service class

7.7. The business_process class

7.8. The business_operation class

7.8.1. The dispacth system

7.8.2. The methods

7.9. The director class

7.10. The objects

7.11. The messages

7.12. How to regsiter a component

7.12.1. register_component

7.12.2. register_file

7.12.3. register_folder

7.13. Direct use of Grongier.PEX

8. Credits

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7.1. The `init.py`file

7.2. The `common` class

7.3. The `business_host` class

7.4. The `inbound_adapter` class

7.5. The `outbound_adapter` class

7.6. The `business_service` class

7.7. The `business_process` class

7.8. The `business_operation` class

7.9. The `director` class

7.10. The `objects`

7.11. The `messages`

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