guerler / gplus Public

Notifications You must be signed in to change notification settings
Fork 2
Star 1

Non-sequential protein structure alignment algorithm. Takes two PDB structures and superimposes secondary structure elements in sequential and non-sequential order. Produces a superimposed PDB-file containing both structures.

1 star 2 forks Branches Tags Activity

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 4 Commits
Makefile		Makefile
README.md		README.md
d1gkub1.pdb		d1gkub1.pdb
d2uaga1.pdb		d2uaga1.pdb
gplus.cpp		gplus.cpp

Repository files navigation

GANGSTA+

Non-Sequential Protein Structure Alignment Algorithm

Please cite: https://onlinelibrary.wiley.com/doi/abs/10.1110/ps.035469.108

Arbeitsgruppe Knapp - Freie Universität Berlin

https://en.wikipedia.org/wiki/MIT_License

1. Build executable

make

2. Run example

./gplus d2uaga1.pdb d1gkub1.pdb

About

Non-sequential protein structure alignment algorithm. Takes two PDB structures and superimposes secondary structure elements in sequential and non-sequential order. Produces a superimposed PDB-file containing both structures.

Report repository

Releases

No releases published

Packages

No packages published

Languages