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Merge pull request #31 from gustaveroussy/dev
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quentinblampey authored Mar 1, 2024
2 parents fa376f1 + c2947f7 commit a3d438e
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2 changes: 1 addition & 1 deletion CHANGELOG.md
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- Cell GeoDataFrame index consistent with `obs_names`

### Added
- Support for python 3.9 to 3.12 (we still recommend `python==3.10`)
- Support for python 3.9 to 3.11 (we still recommend `python==3.10`)
- Support WSI analysis: reader, tissue segmentation, patch embedding (tutorials coming soon)
- Supporting multiple region-of-interest queries
- Can load a custom cellpose model using the `pretrained_model`/`model_type` argument
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -30,7 +30,7 @@ The following illustration describes the main steps of `sopa`:
# Installation

### PyPI installation
Sopa can be installed via `PyPI` on all operating systems. The preferred Python version is `python==3.10`, but we also support `3.9` to `3.12`. On a new environment, run the following command:
Sopa can be installed via `PyPI` on all operating systems. The preferred Python version is `python==3.10`, but we also support `3.9` to `3.11`. On a new environment, run the following command:
```
pip install sopa
```
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2 changes: 1 addition & 1 deletion docs/getting_started.md
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Sopa can be installed on every OS with `pip` or [`poetry`](https://python-poetry.org/docs/).

The preferred Python version is `python==3.10`, but we also support `3.9` to `3.12`.
The preferred Python version is `python==3.10`, but we also support `3.9` to `3.11`.

!!! note "Advice (optional)"

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