nf-fetchngs-test

Repo for quick testing of nf-fetchngs (https://nf-co.re/fetchngs/1.9)

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Test

To test nf-fetchngs execution using test data, run:

bash runtest_nf-fetchngs.sh

Your console should print the Nextflow log for the run, once every process has been submitted, the following message will appear:

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  nf-fetchngs TEST SUCCESSFUL
  
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nf-fetchngs results for test data should be in the following path:

./results

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Requirements

Compatible OS*:

• Ubuntu 20.04 LTS

Software

Requierment	Version	Required Commands *
Java	v11.0.11	java
Nextflow	22.10.4	nextflow run
Docker	20.10.11

• These commands must be accessible from your $PATH (i.e. you should be able to invoke them from your command line). ** Plan9 port builds many binaries, but you ONLY need the mk utility to be accessible from your command line.