This is a small program that uses .csv files saved from an IMARIS batch run and turns them into LAM ready folders. Instructions:
- First select the IMARIS batch save output that should be a directory named e.g. 'Spots_1_Statistics'
- Then select the output folder
- Finally input a name for this 'spot' e.g. DAPI,GFP or MP.
N.B. this programme requires that the tiffs processed in IMARIS were named in the format: NAME_YYYY-MM-DD_XXXXXX. This is what the tiffs are usually called when they are derived from the AUROX microscope.
- Once finished with 'Spots_1_Statistics', repeat for 'Spots_2_Statistics' making sure to choose the same output folder.
- Repeat for as many spots as you want to compare.