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106 workflow runs

106 workflow runs

breaking: appending to the final rejection log instead of writing to … TOGA2 CI #106: Commit 6b3d76f pushed by ReverendCasy

3m 8s develop

develop

3m 8s

adding domestic template folder TOGA2 CI #105: Commit 47f7cb5 pushed by ReverendCasy

3m 32s develop

develop

3m 32s

fix: missing CodonAlignment class import TOGA2 CI #104: Commit b94c3d7 pushed by ReverendCasy

3m 0s main

main

3m 0s

working paralog pick by novelty TOGA2 CI #103: Commit 2f2d137 pushed by ReverendCasy

2m 59s develop

develop

2m 59s

fix: adding newline TOGA2 CI #102: Commit 0d0cef5 pushed by ReverendCasy

2m 51s main

main

2m 51s

fix: adding newline TOGA2 CI #101: Commit 190a461 pushed by ReverendCasy

3m 8s main

main

3m 8s

hotfix: proper CESAR profiles for non-canonical U12 introns TOGA2 CI #100: Commit 60c4ed9 pushed by ReverendCasy

2m 56s main

main

2m 56s

Adding paralog selection functionality to integrate mode TOGA2 CI #99: Commit 05a35d3 pushed by ReverendCasy

2m 47s develop

develop

2m 47s

Adding envs to singularity containers + exec instead of run in README TOGA2 CI #98: Commit a61b3fd pushed by ReverendCasy

2m 49s main

main

2m 49s

fix: ignore_errors in self._rm/_rmdir TOGA2 CI #97: Commit e6ab312 pushed by ReverendCasy

3m 41s main

main

3m 41s

Merging the v2.0.7a changes into main TOGA2 CI #96: Commit dcd89aa pushed by ReverendCasy

5m 33s main

main

5m 33s

updating .gitignore TOGA2 CI #95: Commit b820528 pushed by ReverendCasy

2m 54s develop

develop

2m 54s

fix: proper proteinf file filtering TOGA2 CI #94: Commit 62e913e pushed by ReverendCasy

3m 6s develop

develop

3m 6s

fix: default input files for test mode TOGA2 CI #93: Commit 0db7abb pushed by ReverendCasy

3m 14s develop

develop

3m 14s

fix: adding paralogs_over_spanning to defaults TOGA2 CI #92: Commit bd42222 pushed by ReverendCasy

3m 0s develop

develop

3m 0s

fix: missing .option TOGA2 CI #91: Commit 8f4f5d3 pushed by ReverendCasy

2m 51s develop

develop

2m 51s

v2.0.7a update TOGA2 CI #90: Commit fec67e9 pushed by ReverendCasy

2m 50s develop

develop

2m 50s

changelog/readme update TOGA2 CI #89: Commit 7c12eea pushed by ReverendCasy

2m 51s develop

develop

2m 51s

upd: adding paralogs_over_spanning TOGA2 CI #88: Commit 89ecd30 pushed by ReverendCasy

2m 36s develop

develop

2m 36s

upd: adding exon_meta_to_bed + removing redundant prints TOGA2 CI #87: Commit 4dc5aa8 pushed by ReverendCasy

4m 48s develop

develop

4m 48s

upd: writing protein.fa from cesar_exec.py TOGA2 CI #86: Commit 3f1d085 pushed by ReverendCasy

4m 42s develop

develop

4m 42s

fix: query_gene->orphan for orphan filtering TOGA2 CI #85: Commit 3c8ad4f pushed by ReverendCasy

4m 38s develop

develop

4m 38s

fix: query_gene->orphan for orphan filtering TOGA2 CI #84: Commit 909285b pushed by ReverendCasy

4m 38s develop

develop

4m 38s

fix: disabling ppgene search if there no multiexon projections TOGA2 CI #83: Commit ae885c0 pushed by ReverendCasy

4m 57s develop

develop

4m 57s

fix: not recording protein sequences missing from --bed TOGA2 CI #82: Commit 6d06051 pushed by ReverendCasy

4m 28s develop

develop

4m 28s