This release fixes a few issues with Genomedata dependencies, namely with "path.py" (now named "path") and "numpy". Both packages deprecated names of equivalent functions or constants and the equivalents have been used in their stead. As a result Path.py/path now has an updated minimum requirement while numpy should be backwards compatible with the 1.0 series release.
Genomedata is available on Bioconda. With Bioconda installed, to install Genomedata run 'conda install genomedata'. Genomedata can still be installed through older methods using "pip", see the Installation instructions for details.
Here is a full list of changes made since the last announcement here:
Enhancements:
- replace deprecated .isdir and .isfile path API uses with is_dir and is_file from version 16.12 onwards
- add numpy 2.0 compatibilty
Known Bugs:
To see all known bugs head to the issue tracker