Only allow named extension array tests

spatialpandas/tests/conftest.py

@@ -0,0 +1,12 @@
+import pytest
+
+
+def pytest_collection_modifyitems(config, items):
+    skip = pytest.mark.skip(reason='Not in "only_run_named_tests"')
+
+    for item in items:
+        # If the class containing this test has the attribute "only_run_named_tests"
+        # then tests with names not in that collection are skipped.
+        include_list = getattr(item.cls, "only_run_named_tests", None)
+        if include_list and item.originalname not in include_list:
+            item.add_marker(skip)

spatialpandas/tests/test_fixedextensionarray.py

@@ -143,113 +143,221 @@ def sort_by_key(request):
 
 # Subclass BaseDtypeTests to run pandas-provided extension array test suite
 class TestGeometryConstructors(eb.BaseConstructorsTests):
-    pass
+    only_run_named_tests = set([
+        "test_array_from_scalars",
+        "test_construct_empty_dataframe",
+        "test_dataframe_constructor_from_dict",
+        "test_dataframe_from_series",
+        "test_empty",
+        "test_from_dtype",
+        "test_from_sequence_from_cls",
+        "test_pandas_array",
+        "test_pandas_array_dtype",
+        "test_series_constructor",
+        "test_series_constructor_no_data_with_index",
+        "test_series_constructor_scalar_na_with_index",
+        "test_series_constructor_scalar_with_index",
+        "test_series_given_mismatched_index_raises",
+    ])
 
 
 class TestGeometryDtype(eb.BaseDtypeTests):
-    pass
+    only_run_named_tests = set([
+        "test_array_type",
+        "test_check_dtype",
+        "test_construct_from_string",
+        "test_construct_from_string_another_type_raises",
+        "test_construct_from_string_own_name",
+        "test_construct_from_string_wrong_type_raises",
+        "test_eq",
+        "test_eq_with_numpy_object",
+        "test_eq_with_self",
+        "test_eq_with_str",
+        "test_get_common_dtype",
+        "test_hashable",
+        "test_infer_dtype",
+        "test_is_dtype_from_name",
+        "test_is_dtype_from_self",
+        "test_is_dtype_other_input",
+        "test_is_dtype_unboxes_dtype",
+        "test_is_not_object_type",
+        "test_is_not_string_type",
+        "test_kind",
+        "test_name",
+        "test_str",
+    ])
 
 
 class TestGeometryGetitem(eb.BaseGetitemTests):
-    @pytest.mark.skip(reason="non-None fill value not supported")
-    def test_take_non_na_fill_value(self):
-        pass
-
-    @pytest.mark.skip(reason="non-None fill value not supported")
-    def test_reindex_non_na_fill_value(self, data_missing):
-        pass
-
-    @pytest.mark.skip("Cannot mask with a boolean indexer containing NA values")
-    def test_getitem_boolean_na_treated_as_false(self, data):
-        pass
-
-    @pytest.mark.skip("Passing an invalid index type is not supported")
-    def test_getitem_invalid(self, data):
-        pass
+    only_run_named_tests = set([
+        "test_ellipsis_index",
+        "test_get",
+        "test_getitem_boolean_array_mask",
+        #"test_getitem_boolean_na_treated_as_false",
+        "test_getitem_ellipsis_and_slice",
+        "test_getitem_empty",
+        "test_getitem_integer_array",
+        "test_getitem_integer_with_missing_raises",
+        #"test_getitem_invalid",
+        "test_getitem_mask",
+        "test_getitem_mask_raises",
+        "test_getitem_scalar",
+        "test_getitem_scalar_na",
+        "test_getitem_series_integer_with_missing_raises",
+        "test_getitem_slice",
+        "test_iloc_frame",
+        "test_iloc_frame_single_block",
+        "test_iloc_series",
+        "test_item",
+        "test_loc_frame",
+        "test_loc_iloc_frame_single_dtype",
+        "test_loc_len1",
+        "test_loc_series",
+        "test_reindex",
+        #"test_reindex_non_na_fill_value",
+        "test_take",
+        "test_take_empty",
+        "test_take_negative",
+        #"test_take_non_na_fill_value",
+        "test_take_out_of_bounds_raises",
+        "test_take_pandas_style_negative_raises",
+        "test_take_sequence",
+        "test_take_series",
+    ])
 
 
 class TestGeometryGroupby(eb.BaseGroupbyTests):
-    @pytest.mark.skip(
-        reason="The truth value of an array with more than one element is ambiguous."
-    )
-    def test_groupby_apply_identity(self):
-        pass
+    only_run_named_tests = set([
+        "test_groupby_agg_extension",
+        "test_groupby_apply_identity",
+        "test_groupby_extension_agg",
+        "test_groupby_extension_apply",
+        "test_groupby_extension_no_sort",
+        "test_groupby_extension_transform",
+        "test_grouping_grouper",
+        "test_in_numeric_groupby",
+    ])
 
 
 class TestGeometryInterface(eb.BaseInterfaceTests):
-    # # NotImplementedError: 'GeometryList' does not support __setitem__
-    @pytest.mark.skip(reason="__setitem__ not supported")
-    def test_copy(self):
-        pass
-
-    @pytest.mark.skip(reason="__setitem__ not supported")
-    def test_view(self, data):
-        pass
-
-    @pytest.mark.skip(reason="contains not supported")
-    def test_contains(self):
-        pass
+    only_run_named_tests = set([
+        "test_array_interface",
+        "test_can_hold_na_valid",
+        #"test_contains",
+        #"test_copy",
+        "test_is_extension_array_dtype",
+        "test_isna_extension_array",
+        "test_is_numeric_honored",
+        "test_len",
+        "test_memory_usage",
+        "test_ndim",
+        "test_no_values_attribute",
+        "test_size",
+        "test_tolist",
+        #"test_view",
+    ])
 
 
 class TestGeometryMethods(eb.BaseMethodsTests):
-    # # AttributeError: 'RaggedArray' object has no attribute 'value_counts'
-    @pytest.mark.skip(reason="value_counts not supported")
-    def test_value_counts(self):
-        pass
-
-    # Ragged array elements don't support binary operators
-    @pytest.mark.skip(reason="ragged does not support <= on elements")
-    def test_combine_le(self):
-        pass
-
-    @pytest.mark.skip(reason="ragged does not support + on elements")
-    def test_combine_add(self):
-        pass
-
-    @pytest.mark.skip(reason="combine_first not supported")
-    def test_combine_first(self):
-        pass
-
-    @pytest.mark.skip(reason="ragged does not support insert with an invalid scalar")
-    def test_insert_invalid(self, data, invalid_scalar):
-        pass
-
-    @pytest.mark.skip(
-        reason="Searchsorted seems not implemented for custom extension arrays"
-    )
-    def test_searchsorted(self):
-        pass
-
-    @pytest.mark.skip(
-        reason="__setitem__ not supported"
-    )
-    def test_shift_0_periods(self, data):
-        pass
-
-    @pytest.mark.skip(
-        reason="value_counts not yet supported"
-    )
-    def test_value_counts_with_normalize(self, data):
-        pass
-
-    @pytest.mark.skip(reason="ragged does not support where on elements")
-    def test_where_series(self):
-        pass
+    only_run_named_tests = set([
+        "test_apply_simple_series",
+        "test_argmax_argmin_no_skipna_notimplemented",
+        "test_argmin_argmax",
+        "test_argmin_argmax_all_na",
+        "test_argmin_argmax_empty_array",
+        "test_argreduce_series",
+        "test_argsort",
+        "test_argsort_missing",
+        "test_argsort_missing_array",
+        #"test_combine_add",
+        #"test_combine_first",
+        #"test_combine_le",
+        "test_container_shift",
+        "test_count",
+        "test_delete",
+        "test_diff",
+        "test_equals",
+        "test_factorize",
+        "test_factorize_empty",
+        "test_factorize_equivalence",
+        "test_fillna_copy_frame",
+        "test_fillna_copy_series",
+        "test_fillna_length_mismatch",
+        "test_hash_pandas_object_works",
+        "test_insert",
+        #"test_insert_invalid",
+        "test_insert_invalid_loc",
+        "test_nargsort",
+        "test_not_hashable",
+        "test_repeat",
+        "test_repeat_raises",
+        #"test_searchsorted",
+        "test_series_count",
+        #"test_shift_0_periods",
+        "test_shift_empty_array",
+        "test_shift_fill_value",
+        "test_shift_non_empty_array",
+        "test_shift_zero_copies",
+        "test_sort_values",
+        "test_sort_values_frame",
+        "test_sort_values_missing",
+        "test_unique",
+        #"test_value_counts",
+        "test_value_counts_default_dropna",
+        #"test_value_counts_with_normalize",
+        #"test_where_series",
+    ])
 
 
 class TestGeometryPrinting(eb.BasePrintingTests):
-    pass
+    only_run_named_tests = set([
+        "test_array_repr",
+        "test_array_repr_unicode",
+        "test_dataframe_repr",
+        "test_dtype_name_in_info",
+        "test_series_repr",
+    ])
 
 
 class TestGeometryMissing(eb.BaseMissingTests):
-    pass
+    only_run_named_tests = set([
+        "test_dropna_array",
+        "test_dropna_frame",
+        "test_dropna_series",
+        "test_fillna_fill_other",
+        "test_fillna_frame",
+        "test_fillna_limit_backfill",
+        "test_fillna_limit_pad",
+        "test_fillna_no_op_returns_copy",
+        "test_fillna_scalar",
+        "test_fillna_series",
+        "test_fillna_series_method",
+        "test_isna",
+        "test_isna_returns_copy",
+        "test_use_inf_as_na_no_effect",
+    ])
 
 
 class TestGeometryReshaping(eb.BaseReshapingTests):
-    @pytest.mark.skip(reason="__setitem__ not supported")
-    def test_ravel(self):
-        pass
-
-    @pytest.mark.skip(reason="transpose with numpy array elements seems not supported")
-    def test_transpose(self):
-        pass
+    only_run_named_tests = set([
+        "test_align",
+        "test_align_frame",
+        "test_align_series_frame",
+        "test_concat",
+        "test_concat_all_na_block",
+        "test_concat_columns",
+        "test_concat_extension_arrays_copy_false",
+        "test_concat_mixed_dtypes",
+        "test_concat_with_reindex",
+        "test_merge",
+        "test_merge_on_extension_array",
+        "test_merge_on_extension_array_duplicates",
+        #"test_ravel",
+        "test_set_frame_expand_extension_with_regular",
+        "test_set_frame_expand_regular_with_extension",
+        "test_set_frame_overwrite_object",
+        "test_stack",
+        #"test_transpose",
+        "test_transpose_frame",
+        "test_unstack",
+    ])