CGT v0.3.1

Release 0.3.1 of the Covid-19 Genotyping Tool. Updates include:

• Downsampling GISAID sequences to 20'000, using sequences processed from June onwards
• Travel history metadata
• Stricter sequence quality thresholds
• More stable UMAP projection
• Minor UI changes
• McMaster mirror (https://bergen.mcmaster.ca/covidgenotyper/)

CGT v0.2.2

Release 0.2.2 of the Covid-19 Genotyping Tool. Updates include:

• Weekly update to include 2000+ new filtered GISAID sequences
• Masking homoplasic sites prior to DNA distance calculation
• Full core utilization for user-input data processing
• Minor UI fixes

CGT v0.2.1

Minor UI fixes, removed nextstrain metadata. Using direct metadata from GISAID.

CGT v0.2

GCE cloud deployment on covidgenotyper.app

CGT v0.1

Merge pull request #5 from hsmaan/release

Release