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@hwanglab

Hwang Lab

We are amachine learning lab focused on translational research. We develop machine learning algorithms to understand genetic and clinical attributes of disease.

Popular repositories Loading

  1. singlecell_tutorial singlecell_tutorial Public

    single cell sequencing analysis tutorial

    HTML 16 7

  2. tcga_tmb_prediction tcga_tmb_prediction Public

    TCGA BLCA tmb prediction by Hongming Xu

    MATLAB 13 4

  3. TILs_Analysis TILs_Analysis Public

    Pan-cancer tils analysis study by Hongming Xu

    Python 13 2

  4. divine divine Public

    Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data

    Python 12 1

  5. NTriPath NTriPath Public

    NTriPath Matlab code

    MATLAB 6 3

  6. rnaseq_workshop rnaseq_workshop Public

    Cleveland Clinic Bioinformatics Workshop for RNA-Seq data analysis

    6 4

Repositories

Showing 10 of 28 repositories
  • MSI-SEER Public
    hwanglab/MSI-SEER’s past year of commit activity
    Python 0 0 0 0 Updated Jul 19, 2024
  • HE_IHC_HN_analysis Public

    Integrative Spatial Analysis of H&E and IHC Images Identifies Prognostic Immune Subtypes correlated with Progression Free Survival in HPV-Related Oropharyngeal Squamous Cell Carcinoma

    hwanglab/HE_IHC_HN_analysis’s past year of commit activity
    Jupyter Notebook 5 GPL-2.0 1 1 0 Updated Jul 8, 2024
  • istar Public Forked from daviddaiweizhang/istar
    hwanglab/istar’s past year of commit activity
    Python 0 GPL-3.0 13 0 0 Updated May 17, 2024
  • GC_ICI_response_prediction Public
    hwanglab/GC_ICI_response_prediction’s past year of commit activity
    Python 0 0 0 0 Updated Apr 7, 2024
  • WSI_registration Public
    hwanglab/WSI_registration’s past year of commit activity
    Jupyter Notebook 1 Apache-2.0 0 0 0 Updated Sep 19, 2023
  • test Public
    hwanglab/test’s past year of commit activity
    Python 0 0 0 0 Updated May 31, 2023
  • tcga_stroma_prediction Public
    hwanglab/tcga_stroma_prediction’s past year of commit activity
    Python 2 0 0 0 Updated May 11, 2023
  • AML_biomarkers Public
    hwanglab/AML_biomarkers’s past year of commit activity
    R 2 0 0 0 Updated Feb 7, 2023
  • wsitiler Public

    Tools for dividing pathology whole slide images into tiles and save them as individual files.

    hwanglab/wsitiler’s past year of commit activity
    Python 2 GPL-3.0 0 4 0 Updated Jan 19, 2023
  • Stromal_ACTA2_ICI_Analysis Public
    hwanglab/Stromal_ACTA2_ICI_Analysis’s past year of commit activity
    R 1 0 0 0 Updated Oct 21, 2022
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