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CI: Fix Yoda integration tests #298

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Jan 30, 2025
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CI: Fix Yoda integration tests #298

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10 changes: 7 additions & 3 deletions .github/workflows/integration-tests-yoda.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -14,6 +14,10 @@ on:
- 'tutorials/**'
- 'README.md'


env:
YODA_BRANCH: release-1.9

jobs:
build:
runs-on: ubuntu-22.04
Expand All @@ -40,7 +44,7 @@ jobs:

- name: Clone Yoda repo for Docker Setup
run: |
git clone -b v1.9.4 --single-branch https://github.com/UtrechtUniversity/yoda.git
git clone -b "$YODA_BRANCH" --single-branch https://github.com/UtrechtUniversity/yoda.git

- name: Prepare hosts file for integration tests
run: |
Expand All @@ -64,15 +68,15 @@ jobs:
run: |
cd yoda/docker/compose
docker exec provider.yoda sh -c 'set -x ; cd /etc/irods/yoda-ruleset && sudo chown irods:irods -R /etc/irods/yoda-ruleset && sudo -u irods git config remote.origin.fetch "+refs/heads/*:refs/remotes/origin/*" && sudo -u irods git pull && sudo -u irods git status'
docker exec provider.yoda sh -c "set -x ; cd /etc/irods/yoda-ruleset && sudo -u irods git checkout development && sudo -u irods python -m pip --no-cache-dir install --user -r /etc/irods/yoda-ruleset/requirements.txt && sudo -u irods make && sudo -u irods make install"
docker exec provider.yoda sh -c "set -x ; cd /etc/irods/yoda-ruleset && sudo -u irods git checkout \"$YODA_BRANCH\" && sudo -u irods python -m pip --no-cache-dir install --user -r /etc/irods/yoda-ruleset/requirements.txt && sudo -u irods make && sudo -u irods make install"
docker exec provider.yoda sh -c "set -x ; sudo -u irods /var/lib/irods/irodsctl restart"

- name: Pull and install latest version of portal
shell: bash
run: |
cd yoda/docker/compose
docker exec portal.yoda sh -c 'set -x ; cd /var/www/yoda && git config remote.origin.fetch "+refs/heads/*:refs/remotes/origin/*" && git pull'
docker exec portal.yoda sh -c 'set -x ; cd /var/www/yoda && git checkout development || git checkout development'
docker exec portal.yoda sh -c 'set -x ; cd /var/www/yoda && git checkout "$YODA_BRANCH"'
docker exec portal.yoda sh -c 'set -x ; cd /var/www/yoda && git status'
docker exec portal.yoda sh -c 'set -x ; touch /var/www/yoda/*.wsgi'

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