Skip to content

igemsoftware2020/Team_UESTC_Software

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

20 Commits
 
 
 
 
 
 

Repository files navigation

Installation

In order to share our project widely, we decided to use Nginx. If you only want to try CPD3DS, just click here.

If you want to run our project on your localhost to be deepen. Please make sure you have already reached those requirements.

  • Windows

Clone our project:

$ git clone https://github.com/igemsoftware2020/Team_UESTC_Software

After gitclone, firstly, go to preject:

$ cd Nginx

In this folder, click the nginx.exe to run the project, then, you can visit http://localhost:80 to see our project running on your local.

About CPD3DS

CPD3DS integrates CATH and SCOP/SCOP2 , in order to provide as comprehensive and detailed structure domain information as possible. At present, we have achieved remarkable results in four aspects: design ideas originality , data integrity, content accuracy and user-friendliness.

  1. Initiated domain classification according to the shape of domain through 3DZD & K-means.
  2. Through Uniprot, CATH, SCOP/SCOP2 and PDB, we have integrated domain division, related functions and probability combination into our own project website, so as to form a complete system of domain shape division, sequence, structure, function and evolutionary relationship.
  3. We use an authoritative database recognized by the synthetic biology community. Their strict review system and supporting materials ensure the accuracy of the content on our website.

We strive to make CPD3DS a more integrated and user-friendly database that provides synthetic biologists with long-term, stable data updates and search services.

Currently, the team has developed very practical functions on CPD3DS and plan to develop it further.

Protein brick

Hope to make the idea of ynthetic biology more accessible and easier to the public, we decided to develop a puzzle game. Protein brick comes out.

Usage

After clone, go to folder Protein_Block where contain all we need. Just run .exe in the protein brick file directly to play.

Advance Information

To know more about CPD3DS, you can come to our wiki page. What's more, here is a demonstration video which can be a user guide for you to use CPD3DS.

Contact Us

If you have any suggestions, welcome to contact us on zhotoa@foxail.com.