Add pandas and numpy >= 2 compatibility #1070
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: build | |
| on: | |
| push: | |
| branches: [ master, develop ] | |
| pull_request: | |
| jobs: | |
| test: | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest] | |
| python: ['3.8', '3.9', '3.10', '3.11'] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python }} | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - uses: actions/cache@v3 | |
| with: | |
| path: ~/.cache/pip | |
| key: ${{ runner.os }}-pip-${{ hashFiles('**/pyproject.toml') }} | |
| restore-keys: | | |
| ${{ runner.os }}-pip- | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e .[test] | |
| - name: Lint with pre-commit | |
| run: | | |
| make lint | |
| - name: Test with pytest | |
| run: | | |
| pytest -m "not spark" | |
| test_spark: | |
| strategy: | |
| matrix: | |
| include: | |
| # - SPARK_VERSION: "2.4.8" | |
| # HADOOP_VERSION: "2.7" | |
| # JAVA_VERSION: "8" | |
| # python: "3.7" | |
| # os: ubuntu-latest | |
| - SPARK_VERSION: "3.3.2" | |
| HADOOP_VERSION: "3" | |
| JAVA_VERSION: "11" | |
| python: "3.8" | |
| os: ubuntu-latest | |
| runs-on: ${{ matrix.os }} | |
| name: ${{ matrix.os }}, Spark ${{ matrix.SPARK_VERSION}}, Python ${{ matrix.python }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python }} | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Cache pip + Spark | |
| id: cache-spark | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| /home/runner/work/spark.tgz | |
| ~/.cache/pip | |
| key: ${{ runner.os }}-spark-${{ matrix.SPARK_VERSION }}-hadoop${{ matrix.HADOOP_VERSION }}-java${{ matrix.JAVA_VERSION }}-${{ hashFiles('**/pyproject.toml') }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip setuptools | |
| pip install -e .[test] | |
| - name: Download spark | |
| if: steps.cache-spark.outputs.cache-hit != 'true' | |
| env: | |
| BUILD_DIR: "/home/runner/work/" | |
| SPARK_VERSION: "${{ matrix.SPARK_VERSION }}" | |
| HADOOP_VERSION: "${{ matrix.HADOOP_VERSION }}" | |
| run: | | |
| curl https://archive.apache.org/dist/spark/spark-${SPARK_VERSION}/spark-${SPARK_VERSION}-bin-hadoop${HADOOP_VERSION}.tgz --output ${BUILD_DIR}spark.tgz | |
| - name: Install Spark | |
| env: | |
| BUILD_DIR: "/home/runner/work/" | |
| SPARK_VERSION: "${{ matrix.SPARK_VERSION }}" | |
| HADOOP_VERSION: "${{ matrix.HADOOP_VERSION }}" | |
| SPARK_HOME: "/home/runner/work/spark/" | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get -y install openjdk-${{ matrix.JAVA_VERSION }}-jdk | |
| tar -xvzf ${BUILD_DIR}spark.tgz && mv spark-${SPARK_VERSION}-bin-hadoop${HADOOP_VERSION} ${SPARK_HOME} | |
| pip install "pytest-spark>=0.6.0" "pyarrow>=0.8.0" | |
| # https://github.com/python-poetry/poetry/issues/6792 | |
| pip3 install "pypandoc<1.8" | |
| pip install "pyspark==${SPARK_VERSION}" | |
| - name: Test with pytest (spark-specific) | |
| env: | |
| BUILD_DIR: "/home/runner/work/" #${{ github.workspace }} | |
| JAVA_HOME: "/usr/lib/jvm/java-${{ matrix.JAVA_VERSION }}-openjdk-amd64" | |
| SPARK_VERSION: "${{ matrix.SPARK_VERSION }}" | |
| HADOOP_VERSION: "${{ matrix.HADOOP_VERSION }}" | |
| SPARK_HOME: "/home/runner/work/spark/" | |
| SPARK_LOCAL_IP: "localhost" | |
| run: | | |
| pytest -m spark | |
| examples: | |
| runs-on: ubuntu-latest | |
| needs: | |
| - test | |
| - test_spark | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.8 | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: 3.8 | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e . | |
| pip install scikit-learn | |
| - name: Download datasets | |
| run: | | |
| wget https://www.win.tue.nl/~mpechen/data/DriftSets/hyperplane1.arff -O examples/synthetic_data_streams/data/hyperplane1.arff | |
| - name: Build examples | |
| run: | | |
| cd examples | |
| python synthetic_data.py | |
| python flight_delays.py | |
| cd synthetic_data_streams | |
| python hyperplane.py | |
| - uses: actions/upload-artifact@v2 | |
| with: | |
| name: synthetic-report | |
| path: examples/test_data_report.html | |
| if-no-files-found: error | |
| - uses: actions/upload-artifact@v2 | |
| with: | |
| name: flight-delays-report | |
| path: examples/flight_delays_report.html | |
| if-no-files-found: error | |
| - uses: actions/upload-artifact@v2 | |
| with: | |
| name: hyperplane-1-report | |
| path: examples/synthetic_data_streams/reports/hyperplane_1.html | |
| if-no-files-found: error |