Add pandas and numpy >= 2 compatibility #1076
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| name: build | |
| on: | |
| push: | |
| branches: [ master, develop ] | |
| pull_request: | |
| jobs: | |
| test: | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest] | |
| python: ['3.9', '3.10', '3.11', '3.12'] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python }} | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - uses: actions/cache@v3 | |
| with: | |
| path: ~/.cache/pip | |
| key: ${{ runner.os }}-pip-${{ hashFiles('**/pyproject.toml') }} | |
| restore-keys: | | |
| ${{ runner.os }}-pip- | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e .[test] | |
| - name: Lint with pre-commit | |
| run: | | |
| make lint | |
| - name: Test with pytest | |
| run: | | |
| pytest -m "not spark" | |
| test_spark: | |
| strategy: | |
| matrix: | |
| include: | |
| - SPARK_VERSION: "3.3.2" | |
| HADOOP_VERSION: "3" | |
| JAVA_VERSION: "11" | |
| python: "3.9" | |
| os: ubuntu-latest | |
| - SPARK_VERSION: "3.5.3" | |
| HADOOP_VERSION: "3" | |
| JAVA_VERSION: "11" | |
| python: "3.9" | |
| os: ubuntu-latest | |
| runs-on: ${{ matrix.os }} | |
| name: ${{ matrix.os }}, Spark ${{ matrix.SPARK_VERSION}}, Python ${{ matrix.python }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python }} | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Cache pip + Spark | |
| id: cache-spark | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| /home/runner/work/spark.tgz | |
| ~/.cache/pip | |
| key: ${{ runner.os }}-spark-${{ matrix.SPARK_VERSION }}-hadoop${{ matrix.HADOOP_VERSION }}-java${{ matrix.JAVA_VERSION }}-${{ hashFiles('**/pyproject.toml') }} | |
| - name: Install pip and setuptools | |
| run: | | |
| python -m pip install --upgrade pip setuptools | |
| - name: Download spark | |
| if: steps.cache-spark.outputs.cache-hit != 'true' | |
| env: | |
| BUILD_DIR: "/home/runner/work/" | |
| SPARK_VERSION: "${{ matrix.SPARK_VERSION }}" | |
| HADOOP_VERSION: "${{ matrix.HADOOP_VERSION }}" | |
| run: | | |
| curl https://archive.apache.org/dist/spark/spark-${SPARK_VERSION}/spark-${SPARK_VERSION}-bin-hadoop${HADOOP_VERSION}.tgz --output ${BUILD_DIR}spark.tgz | |
| - name: Install Spark | |
| env: | |
| BUILD_DIR: "/home/runner/work/" | |
| SPARK_VERSION: "${{ matrix.SPARK_VERSION }}" | |
| HADOOP_VERSION: "${{ matrix.HADOOP_VERSION }}" | |
| SPARK_HOME: "/home/runner/work/spark/" | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get -y install openjdk-${{ matrix.JAVA_VERSION }}-jdk | |
| tar -xvzf ${BUILD_DIR}spark.tgz && mv spark-${SPARK_VERSION}-bin-hadoop${HADOOP_VERSION} ${SPARK_HOME} | |
| pip install "pytest-spark>=0.6.0" "pyarrow>=0.8.0" | |
| # https://github.com/python-poetry/poetry/issues/6792 | |
| pip3 install "pypandoc<1.8" | |
| pip install "pyspark==${SPARK_VERSION}" | |
| - name: Install project dependencies | |
| run: | | |
| pip install -e .[test] | |
| - name: Test with pytest (spark-specific) | |
| env: | |
| BUILD_DIR: "/home/runner/work/" #${{ github.workspace }} | |
| JAVA_HOME: "/usr/lib/jvm/java-${{ matrix.JAVA_VERSION }}-openjdk-amd64" | |
| SPARK_VERSION: "${{ matrix.SPARK_VERSION }}" | |
| HADOOP_VERSION: "${{ matrix.HADOOP_VERSION }}" | |
| SPARK_HOME: "/home/runner/work/spark/" | |
| SPARK_LOCAL_IP: "localhost" | |
| run: | | |
| pytest -m spark | |
| examples: | |
| runs-on: ubuntu-latest | |
| needs: | |
| - test | |
| - test_spark | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.8 | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: 3.8 | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e . | |
| pip install scikit-learn | |
| - name: Download datasets | |
| run: | | |
| wget https://www.win.tue.nl/~mpechen/data/DriftSets/hyperplane1.arff -O examples/synthetic_data_streams/data/hyperplane1.arff | |
| - name: Build examples | |
| run: | | |
| cd examples | |
| python synthetic_data.py | |
| python flight_delays.py | |
| cd synthetic_data_streams | |
| python hyperplane.py | |
| - uses: actions/upload-artifact@v2 | |
| with: | |
| name: synthetic-report | |
| path: examples/test_data_report.html | |
| if-no-files-found: error | |
| - uses: actions/upload-artifact@v2 | |
| with: | |
| name: flight-delays-report | |
| path: examples/flight_delays_report.html | |
| if-no-files-found: error | |
| - uses: actions/upload-artifact@v2 | |
| with: | |
| name: hyperplane-1-report | |
| path: examples/synthetic_data_streams/reports/hyperplane_1.html | |
| if-no-files-found: error |