Command line for automatic export of skull and implant by command lin… #26
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: generate bundles | |
| on: [push] | |
| jobs: | |
| build-win: | |
| name: build windows packages | |
| runs-on: windows-latest | |
| strategy: | |
| matrix: | |
| architecture: ['x64'] | |
| ai_ready: [0, 1] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - name: Put current date into a variable | |
| run: | | |
| $DATE=& Get-Date -format yyyy-MM-dd | |
| echo "DATE=$DATE" >> $env:GITHUB_ENV | |
| - name: Put current commit hash in a variable | |
| run: | | |
| $COMMIT=$(git rev-parse HEAD) | |
| echo "COMMIT=$COMMIT" >> $env:GITHUB_ENV | |
| - name: Setup VC++ 2022 (17.0) | |
| uses: ilammy/msvc-dev-cmd@v1.13.0 | |
| with: | |
| vsversion: '17.0' | |
| arch: ${{ matrix.architecture }} | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.11.2' | |
| cache: 'pip' | |
| - name: Upgrade pip and enable wheel support | |
| run: python -m pip install --upgrade pip setuptools wheel | |
| - name: Install InVesalius requirements | |
| run: pip install -r requirements.txt | |
| - name: Install Pytorch + Cuda 11.8 (only ai-ready build) | |
| if: ${{ matrix.ai_ready == 1}} | |
| run: pip install torch==2.3.1+cu118 --extra-index-url https://download.pytorch.org/whl/cu118 | |
| - name: Compile InVesalius Cython parts | |
| run: | | |
| python3 setup.py build_ext --inplace | |
| python3 setup.py build_plugins | |
| - name: Insert version and commit hash into dialog.py | |
| run: python3 bundle_tools/win/insert_version_date.py ./invesalius/gui/dialogs.py ${{ env.DATE }} ${{ env.COMMIT }} nightly | |
| - uses: suisei-cn/actions-download-file@818d6b7dc8fe73f2f924b6241f2b1134ca1377d9 | |
| id: pyinstaller | |
| name: Download pyinstaller | |
| with: | |
| url: "https://github.com/pyinstaller/pyinstaller/archive/refs/tags/v6.9.0.zip" | |
| target: ./pyinstaller/ | |
| - name: Extract pyinstaller file | |
| uses: ihiroky/extract-action@v1 | |
| with: | |
| file_path: ./pyinstaller/v6.9.0.zip | |
| extract_dir: ./pyinstaller/ | |
| - name: Compile pyinstaller bootloader | |
| run: | | |
| cd ./pyinstaller/pyinstaller-6.9.0/bootloader/ | |
| python3 ./waf distclean all | |
| cd .. | |
| pip install . | |
| - name: Download mandible ai weight | |
| if: ${{ matrix.ai_ready == 1 }} | |
| uses: suisei-cn/actions-download-file@818d6b7dc8fe73f2f924b6241f2b1134ca1377d9 | |
| with: | |
| url: "https://raw.githubusercontent.com/invesalius/weights/main/mandible_ct/mandible_jit_ct.pt" | |
| target: ./ai/mandible_jit_ct/ | |
| - name: Download cranioplasty binary ai weight | |
| if: ${{ matrix.ai_ready == 1 }} | |
| uses: suisei-cn/actions-download-file@818d6b7dc8fe73f2f924b6241f2b1134ca1377d9 | |
| with: | |
| url: "https://raw.githubusercontent.com/invesalius/weights/main/cranioplasty_jit_ct_binary/cranioplasty_jit_ct_binary.pt" | |
| target: ./ai/cranioplasty_jit_ct_binary/ | |
| - name: Download cranioplasty gray ai weight | |
| if: ${{ matrix.ai_ready == 1 }} | |
| uses: suisei-cn/actions-download-file@818d6b7dc8fe73f2f924b6241f2b1134ca1377d9 | |
| with: | |
| url: "https://raw.githubusercontent.com/invesalius/weights/main/cranioplasty_jit_ct_gray/cranioplasty_jit_ct_gray.pt" | |
| target: ./ai/cranioplasty_jit_ct_gray/ | |
| - name: Download trachea ai weight | |
| if: ${{ matrix.ai_ready == 1 }} | |
| uses: suisei-cn/actions-download-file@818d6b7dc8fe73f2f924b6241f2b1134ca1377d9 | |
| with: | |
| url: "https://github.com/tfmoraes/deep_trachea_torch/releases/download/v1.0/weights.pt" | |
| target: ./ai/trachea_ct/ | |
| - name: Fix trachea name ai weight | |
| if: ${{ matrix.ai_ready == 1 }} | |
| run: | | |
| move ./ai/trachea_ct/weights.pt ./ai/trachea_ct/trachea_ct.pt | |
| - name: Download brain ai weight | |
| if: ${{ matrix.ai_ready == 1 }} | |
| uses: suisei-cn/actions-download-file@818d6b7dc8fe73f2f924b6241f2b1134ca1377d9 | |
| with: | |
| url: "https://github.com/tfmoraes/deepbrain_torch/releases/download/v1.1.0/weights.pt" | |
| target: ./ai/brain_mri_t1/ | |
| - name: Fix brain name ai weight | |
| if: ${{ matrix.ai_ready == 1 }} | |
| run: | | |
| move ./ai/brain_mri_t1/weights.pt ./ai/brain_mri_t1/brain_mri_t1.pt | |
| - name: Generate InVesalius .exe file | |
| run: | | |
| cp ./bundle_tools/win/app.spec ./ | |
| pyinstaller app.spec --clean --noconfirm | |
| mkdir installer | |
| - name: Generate InVesalius installer - win64 ai-ready build | |
| if: ${{ matrix.ai_ready == 1 }} | |
| uses: Minionguyjpro/Inno-Setup-Action@v1.2.2 | |
| with: | |
| path: ./bundle_tools/win/generate_installer.iss | |
| options: /F"invesalius-3.1_nightly_ai-ready_win64" | |
| - name: Generate InVesalius installer - win64 normal build | |
| if: ${{ matrix.ai_ready == 0}} | |
| uses: Minionguyjpro/Inno-Setup-Action@v1.2.2 | |
| with: | |
| path: ./bundle_tools/win/generate_installer.iss | |
| options: /F"invesalius-3.1_nightly_win64" | |
| - name: Show files | |
| run: | | |
| cd ./installer | |
| dir | |
| - name: Upload artifact of package normal file | |
| if: ${{ matrix.ai_ready == 0}} | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| overwrite: true | |
| name: invesalius_package_exe_normal | |
| retention-days: 2 | |
| path: ./installer/*.exe | |
| - name: Upload artifact of package ai-ready file | |
| if: ${{ matrix.ai_ready == 1}} | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| overwrite: true | |
| name: invesalius_package_exe_ai-ready | |
| retention-days: 2 | |
| path: ./installer/*.exe | |
| publish_packages: | |
| name: publish packages | |
| needs: build-win | |
| runs-on: windows-latest | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: invesalius_package_exe_normal | |
| path: ./ | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: invesalius_package_exe_ai-ready | |
| path: ./ | |
| - name: Message | |
| run: | | |
| dir | |
| - name: Update Nightly Release | |
| uses: andelf/nightly-release@main | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| tag_name: nightly | |
| name: 'Nightly' | |
| draft: false | |
| prerelease: ${{ (github.event_name == 'workflow_dispatch' && github.event.inputs.is-pre-release) || (github.event_name == 'schedule')}} | |
| body: | | |
| This is a nightly release InVesalius. | |
| It's unstable compared to the official releases, **use it with caution**! | |
| files: | | |
| ./invesalius-3.1_nightly_ai-ready_win64.exe | |
| ./invesalius-3.1_nightly_win64.exe |