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CADRE_COVID_2020_09_01
XiaoranYan edited this page Oct 9, 2020
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6 revisions
- /N/project/rcsc/raw_data/mag-2020-09-01/CORD19-09-01/litcovid2pubtator-2020-09-13.json
For more information, please refer to https://www.ncbi.nlm.nih.gov/research/coronavirus/
- /N/project/rcsc/raw_data/mag-2020-09-01/CORD19-09-01/CORD-19-MAGinsts-LitCovid-WoS.csv
It contains all columns in /N/project/rcsc/raw_data/2020_09_02/metadata.csv plus the following additional columns:
| Column | Description |
|---|---|
| pmcAuthors | Author information from pmc full text scans |
| pmcAffiliation | Affiliation information from pmc full text scans (mostly empty) |
| pdfAuthors | Author information from pdf full text scans |
| pdfAffiliation | Affiliation information from pmc full text scans (might have department info) |
| pmid | pmid used to match LitCovid records |
| annotations | Curated topic annoations from LitCovid records |
| MAGids | MAGid for recorresponding CORD-19 paper, might have multiple matches |
| authorids | MAG authorIDs for recorresponding CORD-19 paper, delaminated list |
| authorOrders | MAG author orders for recorresponding authors (matched with authorids, affiliationids), delaminated list |
| affiliationids | MAG affiliationIDs for recorresponding CORD-19 paper, one for each author, delaminated list |
| affiliationNames | MAG affiliationNames for recorresponding CORD-19 paper, one for each author, delaminated list |
| GRIDids | GRIDids for recorresponding MAG affiliation, delaminated list |
| UID | WoS Paper ID |
| WoSauthors | WoS author display name list |
| WoSjournal | WoS journal display name |
| pmid_CORD | "pmidMatch" indicates the WoS record is matched using pmid, other records are matched according to the Levenshtein distance similarities listed below (and thus less accurate) |
| score_title_0 | Levenshtein distance similarity ratio for the titles between WoS and CORD-19 |
| score_author_0 | Levenshtein distance similarity ratio for the author names between WoS and CORD-19 |
- /N/project/rcsc/raw_data/mag-2020-09-01/CORD19-09-01/MAGInstTable.csv (also can be found at this GitHub Repo)
affiliationID displayName normalizedName wiki paperTotal citationTotal Latitude Longitude GRIDid
It contains additioanl information for MAG insititutions, with the following columns:
| Column | Description |
|---|---|
| affiliationID | MAG affiliationIDs, mapped to affiliationids of the CORD-MAG mapping table |
| displayName | MAG affiliation displayName |
| normalizedName | MAG affiliation normalizedName |
| wiki | MAG affiliation wikipedia link |
| paperTotal | MAG affiliation paper count in all of MAG |
| paperFamilyTotal | MAG affiliation paperFamily count in all of MAG |
| Iso3166Code | MAG affiliation Iso3166Code |
| citationTotal | MAG affiliation citation count in all of MAG |
| Latitude | MAG Latitude for recorresponding MAG affiliation |
| Longitude | MAG Longitude for recorresponding MAG affiliation |
| GRIDid | GRIDids for recorresponding MAG affiliation |