-
OpenScPCA-analysis Public
Forked from AlexsLemonade/OpenScPCA-analysisAn open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal
HTML Other UpdatedOct 7, 2024 -
datasets Public
Forked from jump-cellpainting/datasetsImages and other data from the JUMP Cell Painting Consortium
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedSep 17, 2024 -
2024-mdibl-fair Public
Instruction materials and setup for MDIBL's 2024 Reproducible and FAIR Bioinformatics Analysis of Omics Data course.
HTML Other UpdatedJul 11, 2024 -
-
alevin-fry Public
Forked from COMBINE-lab/alevin-fry🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
Rust BSD 3-Clause "New" or "Revised" License UpdatedOct 31, 2023 -
OpenPBTA-analysis Public
Forked from AlexsLemonade/OpenPBTA-analysisThe analysis repository for the Open Pediatric Brain Tumor Atlas Project
HTML Other UpdatedAug 9, 2023 -
-
-
Speakers Public
Forked from RVATechMeetups/SpeakersDo you want to speak at a Richmond (RVA) meetup? How about find a speaker for your meetup? You're in the right place!
UpdatedJun 6, 2023 -
rrp-workshop-exercises Public
Forked from AlexsLemonade/rrp-workshop-exercisesMaterials for reproducible research practices workshop exercises.
HTML Other UpdatedOct 19, 2022 -
OpenPBTA-manuscript Public
Forked from AlexsLemonade/OpenPBTA-manuscriptThe manuscript repository for the Open Pediatric Brain Tumor Atlas Project
HTML Other UpdatedSep 1, 2022 -
-
2021-mdibl-fair Public
Instruction materials for MDIBL's 2021 Reproducible and FAIR Bioinformatics Analysis of Omics Data course
-
2020-rladies-phl-ml Public
Code for R-Ladies Philly 2020 Hands-on Machine Learning Workshop
-
openpbta-notebook-concept Public
For hosting notebooks associated with OpenPBTA project via GitHub Pages
HTML BSD 3-Clause "New" or "Revised" License UpdatedMar 31, 2020 -
gitbookdocs Public
Forked from ucscXena/gitbookdocsDocumentation for our gitbook
UpdatedSep 23, 2019 -
2019-applied-bioinformatics Public
refine.bio and advanced machine learning topics material for MDIBL Applied Bioinformatics 2019
-
multi-plier Public
Forked from greenelab/multi-plierA unsupervised transfer learning approach for rare disease transcriptomics
HTML BSD 3-Clause "New" or "Revised" License UpdatedJan 13, 2019 -
psb-manuscript Public
Forked from dhimmel/psb-manuscriptManuscript source for the People of the Pacific Symposium on Biocomputing
CSS Other UpdatedJan 5, 2019 -
rheum-plier-data Public
Forked from greenelab/rheum-plier-dataR BSD 3-Clause "New" or "Revised" License UpdatedDec 24, 2018 -
RLadies_Spatial Public
Forked from MaryELennon/RLadies_SpatialData for the RLadies Spatial Workshop on 11/28/2018
UpdatedNov 28, 2018 -
sra-ena-compare Public
Compare transcript estimates between ENA and SRA fasterq-dump
R BSD 3-Clause "New" or "Revised" License UpdatedOct 12, 2018 -
training-modules Public
Forked from AlexsLemonade/training-modulesA collection of modules that are combined into 1-5 day workshops on computational topics for the childhood cancer research community.
HTML UpdatedJul 17, 2018 -
RNA-Seq-Exercises Public
Forked from AlexsLemonade/RNA-Seq-ExercisesExercises for training scientists to perform some RNA-seq analyses.
-
beadarray-platform-detection Public
-
-
-
RNAseq_titration_results Public
Forked from greenelab/RNAseq_titration_results -
czi-rfa Public
Forked from greenelab/czi-rfaApplication to "Collaborative Computational Tools for the Human Cell Atlas" https://chanzuckerberg.com/initiatives/rfa
Other UpdatedAug 27, 2017 -
ccdl_header Public
Forked from AlexsLemonade/ccdl_headerCode to generate header image for Childhood Cancer Data Lab website
R UpdatedJul 26, 2017