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Link to Christian's profile for AWS ParallelCluster
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jdblischak committed Jul 20, 2022
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4 changes: 4 additions & 0 deletions CHANGELOG.md
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## dev

Link to [Christian's profile for AWS ParallelCluster][snakemake-aws-parallelcluster-slurm]

[snakemake-aws-parallelcluster-slurm]: https://github.com/cbrueffer/snakemake-aws-parallelcluster-slurm

Example that uses pinned conda environments (`pinned-conda-envs`) (requires
minimum of Snakemake version 7.8.0)

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7 changes: 7 additions & 0 deletions README.md
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Expand Up @@ -53,6 +53,10 @@ post][sichong-post] by Sichong Peng nicely explains this strategy for replacing
status script requires Snakemake 7.1.1+). See the section [Multiple
clusters](#multiple-clusters) below

* **New** Adaptable for use with [AWS ParallelCluster][aws-parallelcluster]. See
[Christian Brueffer's][cbrueffer] profile
[snakemake-aws-parallelcluster-slurm][]

## Limitations

* Can't use [group jobs][grouping], but they [aren't easy to use in the first
Expand Down Expand Up @@ -318,6 +322,8 @@ you like. No need to attribute or cite this repo, but of course it comes with no
warranties. To make it official, it's released under the [CC0][] license. See
[`LICENSE`](LICENSE) for details.

[aws-parallelcluster]: https://aws.amazon.com/hpc/parallelcluster/
[cbrueffer]: https://github.com/cbrueffer
[CC0]: https://creativecommons.org/publicdomain/zero/1.0/
[changelog]: https://snakemake.readthedocs.io/en/stable/project_info/history.html
[cluster-cancel]: https://snakemake.readthedocs.io/en/stable/tutorial/additional_features.html#using-cluster-cancel
Expand All @@ -331,3 +337,4 @@ warranties. To make it official, it's released under the [CC0][] license. See
[no-cluster-status]: http://bluegenes.github.io/Using-Snakemake_Profiles/
[sichong-post]: https://www.sichong.site/workflow/2021/11/08/how-to-manage-workflow-with-resource-constraint.html
[slurm-official]: https://github.com/Snakemake-Profiles/slurm
[snakemake-aws-parallelcluster-slurm]: https://github.com/cbrueffer/snakemake-aws-parallelcluster-slurm

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