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Use data downloaded from Cassavabase to make files to input into DSSAT

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jeanlucj/makeDSSATinputFiles

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makeDSSATinputFiles

A workflowr project.

If you run the script makeDSSATinputFiles.Rmd that is in the analysis folder it will:

  1. Create a new .CUL file, with the date of file creation appended to the name
  2. Create new .CSX, .CSA, and .CST files for every trial in UYT_GXE_pheno.csv and put them in the CSfiles folder
    NOTE: it uses the Cassavabase-given studyDbId as part of each CS_ file to ensure that the CS_ file names are unique
    NOTE: the 2018 Ibadan trial does not have a harvest date listed. So that one fails

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Use data downloaded from Cassavabase to make files to input into DSSAT

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