minimap2-sys compile on android using

Works with cross build --target aarch64-linux-android Initial work on #66
jguhlin · Aug 7, 2024 · fc20108 · fc20108
1 parent 6299e62
commit fc20108
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Showing 2 changed files with 10 additions and 5 deletions.
diff --git a/Cargo.toml b/Cargo.toml
@@ -36,8 +36,8 @@ simdutf8 = {version = "0.1", optional = true}
 needletail = { version = "0.5", optional = true, default-features = false}
 
 # Dep for development
-# minimap2-sys = { path = "./minimap2-sys" }
-minimap2-sys = "0.1.19"
+minimap2-sys = { path = "./minimap2-sys" }
+# minimap2-sys = "0.1.19"
 rust-htslib = { version = "0.47", default-features = false, optional = true }
 
 [dev-dependencies]

diff --git a/minimap2-sys/build.rs b/minimap2-sys/build.rs
@@ -122,7 +122,9 @@ fn compile() {
 
     println!("cargo:rustc-link-lib=m");
 
-    println!("cargo:rustc-link-lib=pthread");
+    if !env::var("TARGET").unwrap().contains("android") {
+        println!("cargo:rustc-link-lib=pthread");
+    }
 
     let mut cc = cc::Build::new();
 
@@ -134,7 +136,10 @@ fn compile() {
 
     cc.flag("-DHAVE_KALLOC");
     cc.flag("-lm");
-    cc.flag("-lpthread");
+
+    if !env::var("TARGET").unwrap().contains("android") {
+        cc.flag("-lpthread");
+    }
 
     #[cfg(feature = "static")]
     cc.static_flag(true);
@@ -193,7 +198,7 @@ fn gen_bindings() {
 #[cfg(not(feature = "bindgen"))]
 fn gen_bindings() {}
 
-fn main() {
+fn main() {   
     compile();
     gen_bindings();
 }