Update GitHub Action Versions (#181)

### GitHub Actions Version Updates
* **[github/codeql-action](https://github.com/github/codeql-action)**
published a new release
**[codeql-bundle-20230524](https://github.com/github/codeql-action/releases/tag/codeql-bundle-20230524)**
on 2023-05-24T16:01:13Z
* **[actions/checkout](https://github.com/actions/checkout)** published
a new release
**[v4.1.0](https://github.com/actions/checkout/releases/tag/v4.1.0)** on
2023-09-22T17:42:49Z

.github/workflows/check.yml

@@ -27,7 +27,7 @@ jobs:
       R_KEEP_PKG_SOURCE: yes
 
     steps:
-      - uses: actions/checkout@v4.0.0
+      - uses: actions/checkout@v4.1.0
       - uses: r-lib/actions/setup-pandoc@v2
       - uses: r-lib/actions/setup-r@v2
         with:

.github/workflows/coverage.yml

@@ -15,7 +15,7 @@ jobs:
       CODCOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
 
     steps:
-      - uses: actions/checkout@v4.0.0
+      - uses: actions/checkout@v4.1.0
 
       - uses: r-lib/actions/setup-r@v2
         with:

.github/workflows/docker.yml

@@ -11,7 +11,7 @@ jobs:
   docker:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v4.0.0
+    - uses: actions/checkout@v4.1.0
     - name: Publish to Registry
       uses: elgohr/Publish-Docker-Github-Action@v5
       with:

.github/workflows/document.yml

@@ -11,7 +11,7 @@ jobs:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
     steps:
       - name: Checkout repo
-        uses: actions/checkout@v4.0.0
+        uses: actions/checkout@v4.1.0
         with:
           fetch-depth: 0
 

.github/workflows/gh-release.yml

@@ -9,7 +9,7 @@ jobs:
   build:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v4.0.0
+    - uses: actions/checkout@v4.1.0
     - name: Create a Release
       uses: elgohr/Github-Release-Action@20230626184259
       env:

.github/workflows/gha-versions.yml

@@ -14,7 +14,7 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-      - uses: actions/checkout@v4.0.0
+      - uses: actions/checkout@v4.1.0
         with:
           token: ${{ secrets.WORKFLOW_SECRET }}
 

.github/workflows/git-cliff.yml

@@ -12,7 +12,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout
-        uses: actions/checkout@v4.0.0
+        uses: actions/checkout@v4.1.0
         with:
           fetch-depth: 0
           token: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/labels.yml

@@ -11,7 +11,7 @@ jobs:
   labels:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4.0.0
+      - uses: actions/checkout@v4.1.0
       - uses: micnncim/action-label-syncer@v1.3.0
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/linguist.yml

@@ -7,7 +7,7 @@ jobs:
     name: Run linguist
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4.0.0
+      - uses: actions/checkout@v4.1.0
       - uses: fabasoad/linguist-action@v1.0.5
         id: linguist
         with:

.github/workflows/lint-changes.yml

@@ -10,7 +10,7 @@ jobs:
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
     steps:
-      - uses: actions/checkout@v4.0.0
+      - uses: actions/checkout@v4.1.0
 
       - uses: r-lib/actions/setup-r@v2
 

.github/workflows/lintr.yml

@@ -31,7 +31,7 @@ jobs:
 
     steps:
       - name: Checkout code
-        uses: actions/checkout@v4.0.0
+        uses: actions/checkout@v4.1.0
 
       - name: Setup R
         uses: r-lib/actions/setup-r@v2
@@ -52,7 +52,7 @@ jobs:
           LINTR_ERROR_ON_LINT: false
 
       - name: Upload analysis results to GitHub
-        uses: github/codeql-action/upload-sarif@v2
+        uses: github/codeql-action/upload-sarif@codeql-bundle-20230524
         with:
           sarif_file: lintr-results.sarif
           wait-for-processing: true

.github/workflows/pkgdown.yml

@@ -20,7 +20,7 @@ jobs:
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
     steps:
-      - uses: actions/checkout@v4.0.0
+      - uses: actions/checkout@v4.1.0
 
       - uses: r-lib/actions/setup-pandoc@v2
 

.github/workflows/style.yml

@@ -11,7 +11,7 @@ jobs:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
     steps:
       - name: Checkout repo
-        uses: actions/checkout@v4.0.0
+        uses: actions/checkout@v4.1.0
         with:
           fetch-depth: 0