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jjovelc/README.md

Bioinformatics Lab Banner

Dr. Juan Jovel

Bioinformatics & Computational Biology Research

I lead bioinformatics analyses across diverse research projects, with expertise in genomics, transcriptomics, and microbiome data analysis. My work spans multiple research areas including single-cell RNA-seq, metagenomics, and CRISPR studies.

Research Collaborations & Projects

I collaborate with researchers across multiple labs and institutions:

  • 🧬 Transcriptome Assembly - Building and analyzing transcriptomes for various species including reindeer and chicken
  • 🦠 Metagenomics - Analyzing microbiome data for diverse applications including poultry health and pediatric MS studies
  • 🔬 Single-Cell RNA-seq - Developing analytical frameworks for scRNA-seq data in multiple tissues and species
  • 🧪 CRISPR Studies - Supporting genomic analyses for CRISPR-based research
  • 🧮 Custom Software - Developing tools for visualization and analysis of complex biological data

Featured Tools & Resources

  • Single Cell Explorer - Custom tools for single-cell RNA-seq data analysis
  • BioInformaTony - Educational resources related to my YouTube channel
  • CRISPR Visualization - Tools for visualization of CRISPR clones
  • Workshops - Training materials for bioinformatics education

Looking for Lab Projects?

All lab projects are indexed at Lab Projects Index, organized by Principal Investigator and research area.

Connect

"Transforming biological data into meaningful insights through computational approaches"

Popular repositories Loading

  1. JovelJ_JovelJ_crispr-dav JovelJ_JovelJ_crispr-dav Public

    Forked from pinetree1/crispr-dav

    CRISPR NGS data analysis and visualization pipeline

    Perl

  2. JovelJ_JovelJ_BioInformaTony JovelJ_JovelJ_BioInformaTony Public

    Repo to deposite support files for youtube videos presented in chanel BioInformaTony

    Python

  3. JovelJ_JovelJ_workshops JovelJ_JovelJ_workshops Public

    Here is the materials associated with courses dictated at UofC or elsewhere

    R

  4. JovelJ_JovelJ_software JovelJ_JovelJ_software Public

  5. CheckleyS_ButterA_EcoliGen CheckleyS_ButterA_EcoliGen Public

    Python

  6. CampbellR_UngerC_LNL CampbellR_UngerC_LNL Public

    Description of RNAseq analysis of control vs two lines of mice with longer shanks

    R